Clostridium tetani E88: CTC_02460
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Entry
CTC_02460 CDS
T00112
Name
(GenBank) ATP-dependent DNA helicase rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03420
Nucleotide excision repair
ctc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTC_02460
03430 Mismatch repair
CTC_02460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_02460
Enzymes [BR:
ctc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CTC_02460
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTC_02460
MMR (mismatch excision repair)
Other MMR factors
CTC_02460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
SLFN-g3_helicase
Viral_helicase1
DEAD
AAA_11
zf-C2H2_aberr
ResIII
nSTAND3
NACHT
Motif
Other DBs
NCBI-ProteinID:
AAO36925
UniProt:
Q891C0
LinkDB
All DBs
Position
complement(2609418..2611550)
Genome browser
AA seq
710 aa
AA seq
DB search
MDDLDLNKEIQKELEFNFEKEKLKETIKIINKEILNYLNQRKETINYITEYRKEFLDEYR
DDEDEIVEYFDHEKFIIEEEFKFIDKRLKELTILSSSPYFGKIMFNDDELEETIYIGRFG
LTLKDSYTPLVVDWRAPVSALFYSGNIGKVHYNAPMGKIETNVSLKRQLIIKKARLLGIF
DTELNVKDDILQMVLSRNTADKLKDIIMTIQGEQDNLIRQPRNKTIIVDGVAGSGKTTIA
LHRVAYLLYNYRDTLQDKVLILGPNDIFIDYISMVLPSLGEVGVKQTTFRDFALKLLDIE
NIMSFKDYMEKITNEDDDFVLDIIFKNSTKYIDKLDKFIEDTEKDYFNIKDVKFYDEVIM
EKKEIEEMFFYHFKFMPLFKRSNRIKRVIYSRIKDYRDAKVREIQKKYEENLKNMTSEGR
NLHGTKLEFERRLQIREVISEVIRRKKDLSWLNNPSVLELYNNLNEEKELIQDDLAAILY
LKIKLEGLKYFSEIKHVVIDEAQDYSALEFKVIKELTGCASMTILGDKNQRLIPENEGIA
MENLDKYLDFKDIEYFKLDKSYRSTQEIMEYANNYLKDEPIIPLVRSGEKVVEKQIETHE
ELKEEILKSIKVFREKGYESIAVICKNSMEVNKVNDMIKDSIHIKTVNREDIIYTSGESI
VPSYFAKGLEFDAVILIDSSVEDKNYEKMMYVMATRALHELKVYKIKESA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggatgatttagacttaaataaagaaattcaaaaagaattagaatttaactttgaaaaa
gaaaagttaaaagaaacaataaaaataattaacaaggaaattttaaactatttaaatcaa
agaaaagaaactattaactatataacagaatatagaaaagaattcttagatgaatataga
gatgatgaagatgaaatagtagaatattttgaccatgaaaaatttattatagaagaagaa
tttaaatttattgataaaagacttaaagaacttacaatattatcatcaagtccttatttt
ggtaagattatgtttaatgatgatgaattagaagaaaccatatatataggtagatttgga
cttactttaaaggattcttatacacctttagtagtagattggagagcgccagtatctgca
ctattttattctggtaacattggtaaagtacattataatgcacctatgggaaaaatagaa
accaatgtgtccctaaaaaggcagttaataataaaaaaggctagattattagggatattt
gatacagaattaaatgtaaaagatgacatattacaaatggtattaagtagaaatacagca
gataaacttaaagacataattatgactatacaaggagaacaagataatttaataagacag
cctaggaataaaaccataatagtagatggagtggcaggtagtggcaaaacaactatagca
ttacatagggttgcctatttattatataactatagagatactttgcaggataaggtttta
atattaggtcctaatgacatatttatagattatatatctatggtattaccgagtctggga
gaagtgggagtaaaacaaactacctttagagattttgcgttaaaattattagacatagaa
aatataatgagttttaaagattatatggaaaagataactaatgaagatgatgattttgta
ttagatataatctttaaaaattctactaagtatatagataaactagataagtttatagaa
gatacagaaaaagactatttcaatattaaagatgttaaattttatgatgaagtcattatg
gagaaaaaagaaatagaagaaatgtttttttaccattttaaattcatgcctttatttaaa
agaagtaatagaattaaaagagtaatttattctagaattaaagattatagagatgctaaa
gttagagaaatacaaaaaaaatatgaagaaaaccttaaaaatatgacatcagagggaaga
aacttacatggaactaaattagaatttgaaagaaggcttcagataagagaagttatatct
gaggtaattagaagaaagaaggatctttcatggttaaataatcctagtgttttagagctt
tataataatttaaatgaagaaaaagagcttatacaagatgatttagctgctattttatat
ttaaaaataaagttagaaggtcttaaatatttttcagaaattaaacatgtagttatagac
gaagctcaagattatagtgcattagagtttaaggttataaaagagttaacaggctgtgcg
tccatgactatattaggagataaaaatcaaagacttataccagaaaatgaaggtatagcc
atggaaaatctagataagtacttagattttaaagacatagaatattttaagttagataaa
agctatagatcaactcaagaaataatggaatatgccaataattatttaaaagatgaacct
ataataccattggttagaagtggagaaaaggttgtagaaaaacaaatagaaacccatgaa
gaattaaaagaagaaatactaaaaagtataaaggtatttagagaaaaaggatacgaaagt
atagctgtaatatgtaaaaattctatggaagttaataaagtaaatgatatgataaaagat
agtatacacattaaaactgtaaatagagaagatattatatatacttctggggaaagtata
gttccttcatattttgccaaaggtttggaatttgacgcagtaatattaatagatagtagt
gttgaagataaaaactatgaaaaaatgatgtatgttatggcaactagagcactacatgaa
ttaaaggtatataaaataaaagaatctgcctaa
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