Clostridium tetani E88: CTC_02491
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Entry
CTC_02491 CDS
T00112
Name
(GenBank) DNA polymerase III, alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ctc
Clostridium tetani E88
Pathway
ctc03030
DNA replication
ctc03430
Mismatch repair
ctc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTC_02491
03430 Mismatch repair
CTC_02491
03440 Homologous recombination
CTC_02491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctc03032
]
CTC_02491
03400 DNA repair and recombination proteins [BR:
ctc03400
]
CTC_02491
Enzymes [BR:
ctc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTC_02491
DNA replication proteins [BR:
ctc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTC_02491
DNA repair and recombination proteins [BR:
ctc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTC_02491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
AAO36954
UniProt:
Q890Z1
LinkDB
All DBs
Position
complement(2643543..2647043)
Genome browser
AA seq
1166 aa
AA seq
DB search
MGFMSHKEYNWISLHQHTEYSLLDSSAKITELIKKVKELGMKSIAITDHGVMYGCVEFYK
EAIKEGIKPIIGCEIYVVPKSMHIKRVDNDNAIYHLVLLVKNDVGYRNLMEIVSKASIDG
FYYKPRVDHEFLREHSEGLIASSACLGGEVQSYILKGNIEKAEKAALNYKEIFKEGFYLE
LQDHGMKEQVKVNNELIAMSKRLSIPLVATNDVHYIEKEDSRAHDILLCVQTGKTVEEEN
RMRYPTGEFYLKSPEEMYNLFSHVPEALENTIKIAEQCNFQYNFHESKLPTFPLPDKVDN
YDYLRELCYEGLKEKYDTVDEKLKNRLEYELNVIKEMGYVDYFLIVWDFIRFAKEKDIMT
GPGRGSGAGSIVAYTLGITKIDPIKYGLIFERFLNPERISMPDIDSDFCYERRQEVIDYV
VEKYGENNVSQIATFGTMAARACIRDVGRAMNYSYVEVDKIAKMIPTVPGTSITIDKALQ
LNPELKAIYENDHRINDLINIAIKLEGLPRHTSTHAAGVVIASHPLVNYVPLQKNEGNIV
TQFTMGTLEELGLLKMDFLGLRTLTVMRDAVAMIKENRGIDIDLDKLDFDDKEVYNMIGE
GKTVGVFQLESDGMTSFMRELKPDSLEDIIAGISLYRPGPMAEIPKYISNKKNPEKIEYL
TPRLEDILSVTYGCMVYQEQVMEVVRKLAGYSMGRSDLVRRAMSKKKHDVMEEERKNFVY
GIIDESGNIEVPGCVRNGIDEKIGNKIFDSMLDFASYAFNKSHAAAYAVVAFQTGYLMRY
YPTECIAAMLNSVMGNSEKVAYYTRYAKEEGMEVLPPNVNESYGKFTVKGNRIRFGLAAI
KNVGLNAIENIVEARGKKGTFANLEDFCSKVDLSCINKRAMESLIKAGAFDNFQIFRSRM
LAVHEKVLDSINNDKRKNIQGQVNLFEELEESSLEIQYPNINEFDKKNILSMEKEMTGLY
LSGHPLDEYKNDFKNKVSINISDIVSDKGLEGDLIEGERKVKDGEKVIIGGIITNVNKKA
TRSNEMMAFIEVEDLYGTIEVIIFPKTLSKYKEIIFEDEIIILKGRVNLREGEEPKLICE
DISLFSQYEEEKKIYIRIERKSDLKVSLSKLRIISNEHSGNTPVYLYIEQVKQTYKAKEE
LWLKDEIGVIDWMKRSFGGENVKITK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgggctttatgtcacataaagaatacaattggattagcttacatcaacatacagaatat
tctcttttagatagttctgcaaaaataacagaactaataaaaaaagttaaagaattaggt
atgaaaagtattgccataacagatcatggagttatgtatggatgtgtggaattctataaa
gaagctataaaagaaggtataaaacctataataggttgtgaaatatatgtagtgcctaaa
tccatgcacattaaaagagtagataatgataatgctatataccatttagttcttttagtt
aagaatgatgtaggatacaggaatttaatggaaattgtaagtaaagcatctatagatgga
ttttattataaacccagagtagatcacgaatttttaagagaacatagtgagggattaatt
gcctcaagtgcctgtctgggaggagaagttcaatcttacatattaaaaggaaatatagaa
aaagctgaaaaagctgctttaaattacaaggaaatattcaaagagggattttatttagaa
ctgcaggatcatggaatgaaagaacaggttaaagtaaataatgaacttatagctatgtct
aaaagactatccattccgttagtggcaactaatgatgtgcattatatagaaaaggaagat
tccagggcacatgacatacttctttgcgttcaaactggaaaaaccgtggaggaagagaat
agaatgcgatatcctacaggagagttttacttaaaatctcctgaagagatgtataattta
ttttcacatgttcctgaagcattagaaaatacaattaaaatagcagaacagtgtaatttt
caatataattttcacgaatctaaattacctacattccctcttccagataaagtggataat
tatgattatttaagggaactatgttatgaaggattaaaagaaaaatatgatactgtagat
gaaaaactaaaaaatagacttgaatatgagttaaatgtaataaaggaaatgggatatgta
gattattttcttatagtatgggattttataagatttgctaaagaaaaagatataatgaca
ggacctggaaggggaagtggagcaggttctattgtagcttatactttgggaataactaag
atagaccctattaaatatggtttaatatttgaaagatttttaaatcctgagagaatatct
atgcctgatattgatagtgatttttgttatgaaagaagacaagaggttatagactatgta
gtagaaaagtatggagaaaataatgtatctcaaatagctacatttggaactatggctgcg
agagcttgtataagagatgtaggaagagctatgaattattcctatgtagaagtagataaa
attgcaaaaatgatacctaccgtgcctggaacaagtataactatagataaagcattacaa
ttaaatccagaactaaaggcaatatatgaaaatgaccataggataaatgacttaattaat
attgctattaaattagagggattaccaaggcacacttctactcatgcagcaggagtggta
atagcatctcacccattggtaaattacgtgcctttacagaaaaatgaaggaaatatagtt
acacagtttactatgggaacattagaagaacttggactattaaaaatggattttttaggg
ttaagaaccctaacagtaatgagagatgctgtagctatgataaaagaaaataggggaata
gatatagatttagataaattggattttgatgataaagaagtatataacatgataggagaa
ggaaaaactgtaggagtgttccaattagaatcagatggaatgacaagctttatgagagaa
ctaaaacctgattctctagaggatataatagcaggaataagtctttacagacctgggcct
atggcagaaataccaaagtatatttctaacaaaaaaaatccagaaaaaatagagtattta
acacccaggttagaagatattctttctgttacttacggttgtatggtttaccaagaacag
gtaatggaggttgttagaaagctagccggatactctatgggaagaagtgacttagtaaga
cgtgcaatgtctaaaaagaaacatgatgtaatggaagaagaaagaaaaaattttgtatat
ggaattatagatgaaagtgggaatatagaagtaccaggatgcgtacgtaacggcatagat
gagaaaataggaaataaaatatttgattccatgctagattttgcatcctatgcatttaat
aaatcccatgcagctgcttatgcagtagtggcttttcaaacaggatatttaatgagatac
tatcctacagaatgcattgctgcaatgttgaatagtgttatggggaatagtgaaaaggta
gcgtactatacaagatatgcaaaagaagaaggtatggaagtattaccaccaaatgtaaat
gaaagttatggtaagtttactgtaaaaggaaatagaataagatttgggttagctgctatt
aaaaacgtaggattaaatgctatagaaaatatagtagaagctagaggtaaaaagggaaca
tttgctaatctagaggacttttgttccaaagtggatttaagttgtataaataaaagagcc
atggaaagcttaataaaggcaggagcttttgataattttcagatctttagatctcgaatg
ttagcagttcacgaaaaggtattggattcaataaataatgataaaagaaaaaatattcag
ggacaagtaaacttatttgaagaattagaggaaagtagcctagagattcagtatccaaat
ataaatgaatttgataagaaaaatattttatctatggaaaaagaaatgacaggattatat
ctatcaggacaccctttagatgaatataaaaatgatttcaagaataaagtatctataaac
atatcagatatagtttctgataaaggtctagaaggagaccttatagaaggtgaaagaaaa
gtaaaagatggagaaaaagttataattgggggaataataactaatgtaaataaaaaagca
acaagatctaatgaaatgatggcttttatagaggtagaagatttatatggtactatagaa
gttataatttttcctaaaacactttctaaatataaagaaattatatttgaagatgaaatt
attatattaaaaggtagggttaatttaagagaaggggaagaaccaaaattaatttgtgaa
gatataagtttattttctcaatatgaagaagaaaaaaaaatctatataagaattgaaaga
aagagtgacttaaaagtttctctaagtaaattaagaataatatccaatgaacattcaggt
aacacacctgtttacttgtacatagaacaggttaaacaaacttacaaagccaaagaagaa
ttatggttaaaagatgaaataggagttatagattggatgaaaagaagttttggtggtgaa
aatgttaaaataactaaatga
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