Chlamydia trachomatis F/11-96: O173_03375
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Entry
O173_03375 CDS
T02805
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ctch
Chlamydia trachomatis F/11-96
Pathway
ctch02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ctch00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
O173_03375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctch03021
]
O173_03375
Transcription machinery [BR:
ctch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
O173_03375
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
TatA_B_E
LpqV
Motif
Other DBs
NCBI-GeneID:
16634236
NCBI-ProteinID:
AGT67371
LinkDB
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Position
complement(694326..696041)
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AA seq
571 aa
AA seq
DB search
MRMDTLDSQAAEAAQEEEIQRKLEELVTLAKDQGFITYEEINEILPPSFDTPEQIDQVLI
FLAGMDVQVLNQADVERQKERKKEAKELEGLAKRSEGTPDDPVRMYLKEMGTVPLLTREE
EVEISKRIEKAQVQIERIILRFRYSTKEAVSIAQYLINGKERFDKIVSEKEVEDKTHFLN
LLPKLISLLKEEDAYLEERLLALKDPALSKPDQARLNDELEKCRIRTQAYLRCFHCRHNV
TEDFGEVVFKAYDSFLQLEQQINDLKARAERNKFAAAKLAAARRKLHKREVAAGRTLEEF
KKDVRMLQRWMDKSQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEK
FEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEP
TPEELGEELGFTPDRVREIYKIAQHPISLQAEVGDGGESSFGDFLEDTAVESPAEATGYS
MLKDKMKEVLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKM
RHPIRSKQLRAFLDLLEEEKIGSGKIKSYKN
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatggatacgctagatagtcaagctgccgaggcagctcaagaagaagaaatccaa
agaaagttagaagagttagtcactcttgctaaggatcaagggttcatcacgtatgaagaa
atcaatgaaattcttcctccttctttcgatacgccagaacagatcgatcaagttttaatt
tttctggcgggaatggatgttcaagtcctgaaccaagcagatgtagagcgacagaaagaa
agaaaaaaggaagcaaaagagctagaagggttagctaagcgttctgaaggaacgccagat
gatcctgttcgtatgtatttgaaagaaatgggaaccgttcctctacttactagagaggaa
gaggtggaaatttctaagagaatagaaaaagctcaagttcaaatagaaagaattattttg
cgcttccgctattctacaaaggaagctgtgtcgatcgcgcagtatctcatcaatggtaaa
gaacgatttgataagatcgtttctgaaaaggaagtagaagataagacacacttccttaat
cttctgcccaaactcatctctttattgaaagaagaagatgcatatttggaagagcggctt
cttgctttaaaagatccggcgttgtccaagccagatcaggcaaggttgaatgacgagctg
gagaaatgccgtatccgtacacaagcgtatttgcggtgtttccattgtcgtcataatgtg
acggaagatttcggagaggtggtttttaaggcttatgattcattcttacagttagaacag
caaatcaatgatttgaaagcgcgagctgaaagaaataagtttgccgcagcgaaacttgct
gcagcgcggcgaaagcttcacaagcgtgaggtagcggctggacgcactcttgaagagttt
aaaaaagatgtgcggatgttacagcgttggatggacaagagccaggaagccaaaaaagag
atggtggaatccaacttacggttggtaatttctatcgcgaaaaaatataccaacagaggg
ctgtctttcttggatctgattcaagaaggtaatatgggcttgatgaaggctgttgagaag
tttgagtatcgtagaggatacaagttttcaacttatgccacgtggtggattcgtcaggct
gttacacgggctattgcggatcaagcacgaacgatccgcattcctgttcacatgatagaa
accatcaataaagtgcttcgtggagctaaaaaattaatgatggaaacagggaaagagcct
actccggaagagctcggagaggaattgggctttactccagatcgtgttcgagaaatctat
aaaatagctcaacacccgatttctttgcaagcagaggtcggagatggtggggagagctct
tttggagatttcttggaagatactgctgttgaatctccagcggaggcaacagggtattcc
atgttaaaagataaaatgaaagaagttttgaaaacgcttacggaccgtgagcgttttgtt
ttgattcatcggtttggtcttcttgatggtcgtcccaagactttggaagaggtgggttct
gcattcaatgtaacacgagagcggattcgccaaattgaagctaaagctttacgaaagatg
cgtcatcctatccgttccaaacagttgcgagcgttcctagatctattggaagaagaaaaa
attggttcgggtaagattaaaagttataaaaattag
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