Chlorobaculum tepidum: CT0343
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Entry
CT0343 CDS
T00088
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cte
Chlorobaculum tepidum
Pathway
cte03420
Nucleotide excision repair
cte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CT0343 (uvrD)
03430 Mismatch repair
CT0343 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cte03400
]
CT0343 (uvrD)
Enzymes [BR:
cte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CT0343 (uvrD)
DNA repair and recombination proteins [BR:
cte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CT0343 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CT0343 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_12
DUF3553
AAA_14
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AAM71589
UniProt:
Q8KFI3
LinkDB
All DBs
Position
358119..360398
Genome browser
AA seq
759 aa
AA seq
DB search
MWAANLLFPEALTDFLQGLNDVQRQAVLATEGPVMVLAGAGSGKTRVITYRIAHLIRNVG
VLPQNILALTFTNKAAGEMRQRIDSILEYGSASSLWIGTFHSVFARLLRSYIHLIGYDRN
FSIFDADDSKSLIKQCMKELNLSPETLPVNLVHSAISKAKNSFVLPPEFHRKAIDDQSQK
ISLVYERYVHKLRENNALDFDDLLIKPIELFTEQPRVLEQLQDYFKYLLIDEYQDTNRVQ
YLVAKMIAEKHRNIFVVGDDAQSIYSWRGADISNILNFNDDYGDAQVFKLVDNYRSTKTI
LDAANSVISRNTHQIKKELVANAGMGEPITLIEAFNEKREAEKVAEHIKSIRLSKGAQYR
SFAVFYRTNAQSRVIEDMMRQNRIPYKIFGSVSFYKRKEIKDAVAYMRLVLNDRDSESLL
RVINFPPRKIGDVSINKLKEFAEERNISLYEAVKRAGEGGFQARLVNALTQFTDLIEAMR
KQAEEGTAYDVLSMLYETTGLLSLLKEENTPEALARHENLQELLSMTRDFADHNPNSATL
GDFLSTISLASDYDETQESDNYVSLMTVHAAKGLEFPVVFVTGMEEKLFPLNSYEPGELE
EERRLFYVAITRAREKLFLSWAQSRYMYGQPQMCMRSTFINEINPNIIVTEGGRKLSESP
KKVAATAMAGRPVFGSSLRPQPGGSPAAKVPTVKPAGSARPTGAAKSEYRPGTRVQHAIF
GPGTVLEVQGSGAKQKVKINFRTAGEKTLMVQYANLKIV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgtgggccgctaaccttttatttccagaagctttgacagattttctccagggactcaac
gatgttcagcgacaggccgtgctcgctaccgaaggccccgtgatggtactggcgggcgcg
gggtcgggcaagactcgcgtcattacctaccgcatcgcgcacctcatccgcaacgtcggg
gttttgccccagaacattctcgccctcaccttcaccaacaaggcggcgggcgagatgcgc
cagcgtatcgacagcatcctcgaatatggcagcgcctccagcctctggatcggcaccttc
cactcggtgttcgcgcggcttttgcgcagctacatccacctgatcggctacgatcgcaac
ttctcgattttcgatgccgacgacagcaagagcctcatcaagcagtgcatgaaggagctg
aacctgtcgcccgaaacgctgccggtgaacctcgtgcactcggccatcagcaaggccaag
aacagcttcgtcctgccaccggagttccatcgcaaggcgatcgacgaccagtcgcagaag
atttcgctggtctatgagcgctacgtgcacaagctgcgcgagaacaacgcgctcgatttc
gacgacctgctcatcaagcctatcgagctgttcaccgagcagccgcgtgtgctggagcag
ttgcaggactatttcaagtacctgctcatcgacgagtaccaagacaccaaccgcgtgcag
tacctggtcgccaaaatgatcgccgaaaagcaccggaacatcttcgtcgttggcgacgac
gcgcagtcgatctactcgtggcgcggggcggacatctcgaacatactcaacttcaacgac
gattacggcgacgcgcaggtgttcaagctggtcgataactaccgcagcaccaagacgatt
ctggacgcggccaacagcgtcatcagccgcaacacgcaccagatcaaaaaggagctggtg
gccaacgccggtatgggtgagccgatcacgctgatcgaagcgttcaacgaaaagcgcgag
gccgaaaaggtggccgagcacatcaagtcgatccggctgtcgaagggcgcgcagtaccgc
tcgttcgcggtgttttaccgcaccaacgcccagtcgcgcgtgatcgaggacatgatgcgc
cagaaccgcattccgtacaagattttcggcagcgtgtcgttctacaagcgcaaggagatc
aaggatgccgtggcctacatgcggctcgtgctgaacgaccgtgacagcgagtcgcttctg
cgggtcatcaactttccgccgcgcaagattggcgacgtgagcatcaacaagctcaaggag
ttcgccgaggaacggaacatttcgctctatgaagcggtgaagcgcgcgggtgaggggggc
ttccaggcgcggctcgtcaacgcgctgacgcagttcactgacctcatcgaggcgatgcgg
aagcaggccgaagagggcaccgcctacgacgtgctttcgatgctctacgagaccaccggc
ctgctctcgctcttgaaggaggagaacacgcccgaagcgcttgcgcggcacgagaacctt
caggagctgctctcgatgacgcgcgactttgccgaccacaatcccaattcggccacgctc
ggcgacttcctctcgaccatctcgctcgcctcggactacgacgaaacacaggagtcggat
aactacgtctcgctcatgacggtgcacgcggcgaagggtcttgaatttccggtggtgttc
gtcaccggcatggaggagaagctgttcccgctcaacagctacgaaccgggcgaactggag
gaggagcggcggctcttctacgtggcgatcacccgagcgcgcgaaaagctgttcctctcg
tgggcgcagagccgctatatgtatggccagccgcagatgtgcatgcgctcgaccttcatc
aacgaaatcaaccccaacattatcgtcaccgaaggggggcgcaagctctccgaaagcccg
aaaaaggtcgctgcgacggcgatggccggacgcccggtcttcggctcgtcgctgaggcct
cagccggggggcagcccggcggcaaaggtgccgaccgtcaaacccgccggatcggcgcgt
cccaccggcgcggccaaaagcgagtaccgcccgggcaccagagtgcagcacgctatcttc
ggccccggcaccgtgctcgaagtgcagggcagtggggcgaagcagaaggtcaagatcaac
ttccgcaccgccggcgaaaaaacgctgatggtgcagtacgccaatctgaagatcgtgtga
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