Chlorobaculum tepidum: CT0527
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Entry
CT0527 CDS
T00088
Symbol
uvrA2
Name
(GenBank) excinuclease ABC, subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cte
Chlorobaculum tepidum
Pathway
cte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CT0527 (uvrA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cte03400
]
CT0527 (uvrA2)
DNA repair and recombination proteins [BR:
cte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CT0527 (uvrA2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CT0527 (uvrA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
UvrA_inter
nSTAND3
AAA_15
cobW
Viral_helicase1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AAM71769
UniProt:
Q8KF05
LinkDB
All DBs
Position
533016..535799
Genome browser
AA seq
927 aa
AA seq
DB search
MLGGVSTHNLKHVTVRIPRNRFVVLTGLSGSGKSSLAFDTLYAEGHRRYVESLSAYVRQF
LERMPKPEIETVEGIAPAIAIEQKAIPKNPRSTVGTVSEIYDYLRLLYARIGKIYSRDTG
ELVLKHTPEDVSLQARFFDEGTRFYVGYPFPSHHDERHHDRTVADELKNLLKKGFFRLLK
GESVIDISDDKERAGVEMMKRAELSELLVLVDRFVAKKDEKVYSRVAQAAESCFAESGGQ
AVIRVAGGKEFRFSDRLELNGVTYQEPSPQLFAFNSPIGACTSCQGFGRIAGIDEDAVVP
DKSLSLKEGAISCWNSEKYSWYRKQLLKIAPEVGIPVDVPYEKLGRVHREMLWKGIPERS
FKGLWPFFEEIEKDAGYKVHYRVFLSRYRGYATCPECEGARLNPDALQVRVSGKNIGEVV
RMTIADAQTFFASLDISPFDRSVADSVLREINKRLGYLMDVGLDYLTLDRLTHTLSGGEF
QRINLSTSLGSPLVGAIYILDEPSIGLHQSDSARLVALLKRLRDLGNTVVVVEHDREIIE
AADEVIDLGPRAGRLGGEVVFHGPPSAMAGAEGSLTADYLSGRKQIAVPAERRKPDFSRC
IEIIGAMQNNLRNIDVRFPLGVMTCVTGVSGSGKSTLVNDILKLGIIRAKEGSREKVGTH
RAIKGVEFIEKVEHVDQSPIGKSSRSNPATYLKIFDDIRQLFASTRESKSRGWKPGYFSF
NIPGGRCETCAGEGTVKIEMQFLADIEAVCEECEGKRYKASTLEVKYNGLSISEVLDLTV
EEAISFFGQEKSIQKKLQVLQEVGLEYIRLGQSSSTLSGGEAQRLKLASFISRSDVSNTL
FIFDEPTTGLHFDDISKLVRCFEELMARGNTLVIIEHNPDIIKQADWIIDLGPGAGVRGG
DIVAVGTPEEIVACEASLTGRHLRGYL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
gtgcttggcggcgtttcgacacacaacctcaagcatgtcaccgttcgcattccccgcaac
cggttcgtggttctgaccggcctgagcggttccggcaagtcgagccttgcctttgacacg
ctttacgccgaggggcaccggcgctacgtcgagtcgctttcggcttacgttcgccagttt
ctcgaacggatgcccaaacccgagattgagacggtcgaggggatcgcgcctgccattgcc
atcgagcagaaggcgattccgaaaaatccccgctcgacggttggtaccgtttctgaaatt
tacgactacctgcggctgctctatgcgcgtatcggcaagatctattcacgcgacaccggc
gagctggtgctcaagcacacgcccgaggatgtgagcttgcaggcgcgattcttcgacgaa
ggcacgcgcttctacgtcggctatccctttccgagccaccatgatgagcgtcatcacgac
cgcacggtggccgacgagctgaagaatctgctcaagaaaggctttttccgcctgctgaaa
ggggagagtgtcatcgatatttccgacgacaaggagcgcgccggggtggagatgatgaag
cgcgccgagctgtcggagctgctggtgctggtggatcgcttcgtcgccaaaaaggatgag
aaggtttacagccgcgttgcccaggctgccgaaagctgctttgccgagtcgggcggtcag
gcggtcatccgcgtggcgggcggcaaggagttccgcttcagcgaccggctggagctgaac
ggtgttacctatcaggagccgtcgccccagcttttcgccttcaactctcccatcggggcc
tgtacgtcctgccagggtttcgggcgcatcgccgggatcgacgaggatgcggtggtgccg
gacaagtcgctctcgttgaaggagggggcgatttcgtgctggaactctgaaaagtattcg
tggtaccgcaagcagttgctcaagatcgcgccggaggtgggtattccggttgatgtgccc
tacgaaaaacttggccgcgtacatcgcgagatgctctggaaggggattcccgagcggagc
ttcaagggtttgtggccctttttcgaagagatcgaaaaggacgcgggctacaaagtgcat
taccgggtgttcctgagtcgctaccggggctacgccacctgcccggagtgcgagggggcg
cggctcaatcccgacgccttgcaggtgcgggtttccggcaagaacatcggcgaagtcgtg
cgcatgaccatcgccgatgcgcagaccttttttgccagcctcgacatttcgcctttcgat
cgctcggtggccgactcggtgctgcgcgagatcaacaagcggctcggctacctgatggat
gtcgggcttgactaccttacgctcgaccggctgacgcacaccctctccggcggcgagttt
cagcgcatcaacctctcgacctcactcggctcgccgctggtgggtgcgatctacattctc
gacgagccgagcatcggcttgcaccagagtgactcggcgcgtctcgtggcgctgctcaag
cggttgcgagaccttggcaacacggtggtggtggtcgagcacgaccgcgaaatcatcgag
gctgccgacgaggtgatcgacctcggcccgcgcgccgggcggctcggcggcgaggtagtc
ttccacggtccgccgtcagcaatggccggggcggaggggtcgctgaccgccgactacctc
agcggccgcaagcagatcgccgtgcctgcggagcggcgcaagccggacttttcgcgctgc
atcgaaattatcggagcgatgcagaacaacctgcgcaacatcgacgtcaggttcccgctc
ggcgtcatgacctgcgtcaccggtgtcagcggctccggcaaatcgacactcgtcaacgac
attctcaagctcggcatcatccgtgccaaggagggatcgcgggagaaggtgggcacgcac
cgggccatcaagggcgtcgagttcattgagaaggtcgagcatgttgaccagtcgcccatc
ggcaaatcgagccgcagcaatccggccacttacctcaagattttcgacgatattcgtcag
ctctttgcctcgacccgcgagagcaagtcacgcggctggaagcctggctacttctcgttc
aacatccccggcgggcgctgcgaaacctgtgcaggcgaggggacggtcaagatcgagatg
cagtttctggccgacatcgaggcggtctgcgaggagtgtgagggcaagcgctacaaggct
tcgacgcttgaggtgaaatacaacgggctctccatctccgaggtgctcgacctgaccgtc
gaggaggcgatcagctttttcgggcaggagaagtcgatccagaaaaaacttcaggtgttg
caggaggtggggctcgaatacatccgcctcggccagtcatcgagcaccctttccggcggc
gaggcgcagcggctcaaactcgccagcttcatctcgcgctcggacgtgagcaatacgctt
ttcatcttcgatgaacccaccaccggcctgcacttcgacgacatctccaagctcgtgcgc
tgctttgaggagctgatggcgcgcggcaacacgctggtcatcatcgagcacaaccccgat
atcatcaagcaggccgactggatcatcgacctcggccccggcgcaggtgtgcgtggcggc
gacattgttgctgtgggtacgccggaggagattgtcgcttgcgaagcctcgctcacgggg
aggcatttgcgggggtatttgtag
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