Chlorobaculum tepidum: CT0979
Help
Entry
CT0979 CDS
T00088
Name
(GenBank) membrane-bound lytic murein transglycosylase, putative
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
cte
Chlorobaculum tepidum
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cte01011
]
CT0979
Enzymes [BR:
cte01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CT0979
Peptidoglycan biosynthesis and degradation proteins [BR:
cte01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CT0979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
AAM72214
UniProt:
Q8KDR6
LinkDB
All DBs
Position
926280..927890
Genome browser
AA seq
536 aa
AA seq
DB search
MGAHLFFCLFAAAPCINGALWLCFQIILYCLKPEGASATSSVNPARLVKSFLPLRHFLVC
ISLQVVALSSVSFGAEEPDSASNVRASRVSEMLDSLVTATYFQDDRFSSADRSGSAGYLP
KEFIPQFSDSVYASRIAALASKSRFNLVYNDHVKGFIRLYAVDKRKMVSKVLGLTHIYFP
LFDEVFRQYDIPPEMKYLAIVESALNPTAVSRAGARGLWQFMSGTGRMYGLQSSSFIEDR
YDPTKATVAACQHLRDLYDMFGDWFLVLAAYNAGAGNVQRAIRRAGGAHDYWEIWPYLPQ
ETRGYVPAFIAVTYVMNYYREHNIRPAQPGYLYSETAMVPVKQALTFEQLNETLGVSMDD
LKFLNPQYKAGLIPAPASSPNMIRLPKQYVQLFLQKEQQIYAYKPEMVEEKERLYAMVQE
NDRQDVVFSSGRGQKTHVVGKRETLASVARKYGCSVSQIIDWNNLKSAKLRPGQRLVVFK
VVNERFSRNASATKLKGKKGRLKSKASNAAGKSKVLKKSKSGKKAGKKSGTKKKRK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctcatctgttcttttgtctctttgcggcggctccttgtattaatggtgctctc
tggttatgtttccaaattatactttactgtctcaaacccgagggtgccagcgcaacctca
tctgttaacccagcccggcttgtgaaaagctttttaccgctcaggcattttcttgtctgt
atatccttgcaggttgttgctctgtcttccgtatcgtttggtgcggaggaacccgacagc
gcctcgaacgtgcgagcctcacgtgtttcggaaatgctcgatagcctcgttacggctacc
tattttcaggatgaccggttttcttcggcggataggagcggctccgccgggtatcttccc
aaagagttcatcccccagtttagcgactctgtttatgcgtcaagaattgctgcgctcgcc
agcaaaagccgcttcaatctggtttataatgatcatgtaaaaggctttattcggctttat
gccgttgacaagaggaaaatggtatcgaaggtgcttggcctgacgcatatctattttccg
ctctttgacgaagtgttcaggcagtacgatatccctcctgaaatgaagtacctcgccatc
gtggagtctgcactgaaccccacggcagtgtcccgggccggcgcccgtggtctctggcag
ttcatgagtggtacgggccggatgtacggattgcaatcctcttcgttcattgaggatcgc
tatgaccccacaaaagcgaccgtggcggcgtgccagcatcttcgtgatctgtatgacatg
tttggcgactggtttctcgttctcgcggcctacaatgccggagccggcaatgtgcagcgg
gcgatcagaagagctggcggcgctcacgattactgggagatatggccatacctgccgcag
gagacgcggggttacgttccggccttcatcgcggtgacgtacgtcatgaactactaccgc
gagcacaacatccgtcccgcccagccgggatacctctactcagagaccgccatggttccg
gtcaagcaggcgctgaccttcgagcagctcaacgagacgcttggcgtttcaatggacgac
ctcaaattcctcaatccccagtacaaagcgggcctcattcctgcccctgcatccagcccc
aacatgatccggcttccgaaacaatacgtgcagctgttcctgcaaaaggagcagcagatc
tatgcgtacaagccggagatggttgaagagaaggagcgtctgtatgccatggttcaggag
aacgaccggcaggatgtggtgtttagcagtggccggggccaaaagacgcacgtggttggc
aaacgggagacactcgcaagcgttgctcgtaaatatggctgttcggtcagtcagattatt
gactggaacaatctgaaaagtgcaaagctgaggccgggccagcggctggtggtattcaag
gtggtcaatgagcgattctcccgaaacgcatctgccacgaaactcaagggcaaaaaaggc
cgactgaaatcaaaggcgagcaacgctgcaggcaaaagcaaagttctcaagaaaagcaag
agcggtaaaaaggccggtaagaagagcgggacaaagaaaaaacgcaaataa
DBGET
integrated database retrieval system
