KEGG   Chlorobaculum tepidum: CT1000
Entry
CT1000            CDS       T00088                                 
Name
(RefSeq) ribonuclease II family protein
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
cte  Chlorobaculum tepidum
Brite
KEGG Orthology (KO) [BR:cte00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cte03016]
    CT1000
Enzymes [BR:cte01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     CT1000
Transfer RNA biogenesis [BR:cte03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    CT1000
SSDB
Motif
Pfam: RNB RNase_II_C_S1
Other DBs
NCBI-GeneID: 1007025
NCBI-ProteinID: NP_661893
CyanoBase: CT1000
UniProt: Q8KDP5
LinkDB
Position
948478..949941
AA seq 487 aa
MSRKKGKADIVKIAVGVMLLNGLEPDFSLEAEHQLESIDGPGKENGSEILDLTSLLWCSI
DNDDSRDLDQLTACEVQEDSSIIIYVAIADVDTLVKKGSPIDKHAWINTTSVYTSAKVFP
MLPLRLSTDLTSLNANENRLAIVTIMKIGADGELITSTVERAWVRNKAKLAYDSVAAWLE
GNGELPPAARAVPGMDQQLRHQDQVAQKLRLRRHAKGSLEFETFQPRAVFEGDRVVDIKE
QEKNRARQLIEEFMISTNTCTANFLAEKGVASIRRVVKSPERWRRIVNVASEYGYALPGA
PDGKALESFLALRFKEDPLRFPDLSLTIIKLMGSGEYVVEFPGQEPIGHFGLAERDYTHS
TAPNRRYPDLITLRMTKAFLTNSPPPYGIDELEYLAVHCTRQEDAARKVERRVRKSEAAL
LMQSMIGHHFDAIVSGHSEKGSWVRIFTPPVEGRLVRNVGKIKVGQKIKVKLVLADVDRG
FIDFERV
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgagcaggaaaaaggggaaagccgatatcgttaaaattgcggttggcgtcatgctgctg
aacggtctggagccggatttttcactggaggcggagcatcagctggagtcgattgacggg
ccgggcaaggagaatggctcggaaattctcgatctcacgtcactgctctggtgctcgatc
gataacgacgactcgcgcgatctcgaccagcttaccgcctgtgaagtgcaggaggattcg
tcaatcatcatctacgtggccatcgccgacgtcgataccctggtgaaaaaaggctcgcca
atcgataaacacgcctggataaacaccacctcggtctatacctcggcgaaagtgtttccc
atgctccctctgcgcctctctaccgatctcacctccctcaatgccaacgagaaccggctt
gctatcgtcaccatcatgaagatcggagcggatggcgaactgatcacctccacagtcgag
cgtgcctgggtgcgcaacaaggcgaagctcgcgtacgattccgtcgccgcctggctcgag
ggcaacggcgagctgcctccggcggcccgggcggtgccgggcatggatcagcagttgcgg
catcaggatcaggtagcgcagaagctgcggctacgcaggcacgcaaaaggttcgctggag
ttcgagaccttccagccgcgcgccgttttcgagggagatcgcgtcgttgatatcaaggaa
caggagaagaaccgggcgcggcagctcatcgaggagttcatgatctccaccaacacctgc
accgcaaattttctggcagaaaagggcgtcgcctcgattcgccgcgtcgtcaagtcgcct
gaacggtggcggcgcattgtcaacgtggcgagcgagtacggttacgccttgcccggcgca
cctgacggaaaggcgcttgaaagcttcctcgcattgaggttcaaggaagacccgctccgt
ttccccgatctctccctgaccatcatcaagctcatggggtcgggagagtatgtcgtggag
ttcccggggcaggagccgattggccatttcggccttgccgagcgcgactatacccactcg
acagctccgaacaggcgctatcccgacctgatcaccctgagaatgaccaaggcatttctg
acgaacagtccgccgccctacggcatcgacgagctggagtatctcgcggtacactgcacg
cgccaggaggatgcggcccgcaaggtggagcggcgcgtgcgcaaatccgaagctgcgtta
ctgatgcagagcatgatcggtcaccattttgacgccatcgtctccggccactcggaaaag
ggttcgtgggtgcggatattcacgccgccagtcgaggggcggctggtgaggaacgtcggg
aaaatcaaagtcggccagaaaatcaaggtcaagctcgtgctggcggacgtcgatcgcggc
ttcatcgatttcgaaagggtgtga

DBGET integrated database retrieval system