Chlorobaculum tepidum: CT1034 Help Entry CT1034            CDS       T00088                                  Symbol deaD-2 Name (GenBank) ATP-dependent RNA helicase DeaD   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism cte  Chlorobaculum tepidum Pathway cte03018   RNA degradation Brite KEGG Orthology (KO) [BR:cte00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     CT1034 (deaD-2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cte03019]     CT1034 (deaD-2) Enzymes [BR:cte01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      CT1034 (deaD-2) Messenger RNA biogenesis [BR:cte03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      CT1034 (deaD-2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII AAA_22 AAA_19 ERCC3_RAD25_C Cas3-like_C_2 P-loop_SecA SNF2-rel_dom Motif Other DBs NCBI-ProteinID:  AAM72267 UniProt:  Q8KDL3 LinkDB All DBs Position complement(971014..972258) Genome browser AA seq 414 aa AA seqDB search MPFSALGIIDHLRKALAEEGYNSPTPIQKEAIPVILEGNDLLACAQTGTGKTAAFALPVL QRLHQSRMHGEKRKIRCLVLTPTRELAIQIGESFTAYGRHTGLINTVIFGGVNQNPQTAR LVRGVDILVATPGRLLDLIGQGHLHLRDIEYFVLDEADRMLDMGFIHDIRRVLAVLPKKR QSLFFSATMPPEIIKLSAAILHNPKEVMVTPVSSTVEIINQQILFVDRENKNSLLAHLLK ERNIESALVFTRTKHGADKVARFLAHHDITAEAIHGNKSQNARQRALGNFKTRQTRVLVA TDIAARGIDIDELEYVINIDLPNIPETYVHRIGRTGRAGNRGAAYSFCNAEEKAYLRDIE KLIARKIPVIEDHPFPMVNTIPENAAASKQPARKVPHQKKPSGTHPGNSHWKRK NT seq 1245 nt NT seq  +upstreamnt  +downstreamnt atgcctttttccgctctcggcatcatcgatcatctgcgcaaagctctcgccgaagagggc tacaactcccccaccccgatacagaaagaagctatcccggtcattctcgaaggtaacgac ctgctcgcttgcgcccagaccggcaccggcaaaaccgccgcgttcgcgctgcccgtgctg caacggctgcaccagagccggatgcatggcgaaaagcgtaaaatccgctgcctcgtgctc accccgaccagagagctcgcaatccagatcggcgaaagcttcactgcctatggccgtcat accggcctcataaacaccgtgatttttggcggcgtcaaccagaacccgcagaccgcgcgg ctcgtgcgaggcgtcgatattctggtcgccacgccgggccgcctgctcgatctgatcggc cagggccacctgcacctgcgcgacatcgaatatttcgtgctcgacgaagctgaccggatg ctcgacatgggcttcatccacgacatcagacgagtactggcggttctaccgaaaaaacgg cagtcactcttcttttcggccaccatgccacccgaaatcatcaagctctccgctgcgatt ctgcacaacccgaaagaggtcatggtcacgccggtttcatcgaccgtcgagatcatcaac cagcagattctgttcgttgatcgcgaaaacaagaacagcctgctcgcgcacctgctcaag gaacgaaacatcgaaagcgcgctggtcttcacgcgaaccaagcacggcgcggacaaggtg gcccgttttctggcgcaccacgacatcaccgccgaggcgattcacggcaacaaatcgcaa aacgcccgccagcgcgcgctcggcaacttcaagacgaggcaaacgagagtgctggtcgcc accgacatcgctgcgaggggaatcgacatcgatgaactcgaatatgtcatcaacatcgat ttgcccaacatcccggaaacctacgtgcaccgcattggccgaactggccgggccggaaac cgtggagccgcatactccttctgcaacgccgaagaaaaagcctatctccgcgacatcgaa aaactgatcgcccgaaaaatcccggtcatcgaagatcatccctttccgatggtgaacacg attccggaaaatgctgcagcatcaaagcaaccggcaagaaaggtcccccatcagaaaaaa ccttctggaacccaccccggcaactctcactggaaacggaaatga

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