Chlorobaculum tepidum: CT1167
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Entry
CT1167 CDS
T00088
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cte
Chlorobaculum tepidum
Pathway
cte02024
Quorum sensing
cte03060
Protein export
cte03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CT1167 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CT1167 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CT1167 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cte02044
]
CT1167 (ffh)
Enzymes [BR:
cte01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CT1167 (ffh)
Secretion system [BR:
cte02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CT1167 (ffh)
Eukaryotic Sec-SRP protein
CT1167 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
cobW
CbiA
AAA_18
AAA_17
AAA_33
AAA_30
ATP_bind_1
AAA_16
ATPase
CLP1_P
MMR_HSR1
MobB
APS_kinase
Thymidylate_kin
KTI12
SRPRB
nSTAND3
Glyoxalase_2
KAP_NTPase
NTPase_1
ResIII
DO-GTPase1
PRK
ParA
DUF463
AAA_28
AAA_19
AAA_14
NACHT
AAA_24
ATPase_2
AAA_31
ArsA_ATPase
NPHP3_N
RNA_helicase
Ribosomal_L7Ae
AAA
TsaE
Motif
Other DBs
NCBI-ProteinID:
AAM72400
UniProt:
Q8KD87
LinkDB
All DBs
Position
complement(1097251..1098600)
Genome browser
AA seq
449 aa
AA seq
DB search
MFDNLSDKLELTLKKLAGQATINEVNIGIAMRDIKRALLSADVNYKVAKKLVEDIREKSL
GESVIKSVSPAQMIVKIVNDELTEIMGGQNQPLNLPPKKIPAIVMVAGLQGSGKTTFCAK
LAKRLKKNGKNPILVAADVYRPAAVEQLKTLGEQIDVPVFSIEEQDAMKAALGGLEAAKA
GAKDVVIVDTAGRLQIDEAMMAEAEALKNRLSPDELLFVVDSMMGQEAVNTAKAFNDRLD
FDGVVLTKLDGDARGGAALSIRQVVEKPIKFMSVGEKVDDLDVFYPDRMAQRILGMGDIV
SFVEKAQEALDLEKTMAMQSKLMKNEFDLDDFFDQLQQLKKMGSIQGLIEMVPGLNKMVP
KQDLENINFKPIEAIISSMTKQERKHPEIINGSRRKRIALGSGTRVQEVNMLLKQFAEMK
KMMRSVNRLAKSGRKITTENLALDKFLKR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaatctcagtgacaaacttgagctgaccttaaaaaaactcgccggtcaggcg
acgatcaacgaggtcaacatcggtatcgcgatgcgcgacatcaagcgtgccctcttgagc
gccgatgtcaactacaaggttgccaaaaagctggtcgaggatattcgcgagaagtccctc
ggcgaatcggtcatcaagagcgtctctccggcgcagatgatcgtcaagatcgtcaacgat
gagctaaccgaaatcatgggcggccagaaccagccgctgaatctccctcccaagaaaatt
cctgccatcgtgatggttgccggtctccagggttccggcaaaaccaccttctgcgccaag
ctggccaagcgcctcaaaaagaacggcaagaatccgatccttgtcgccgccgacgtttac
cgtccggcagcggtcgagcagctcaagacgctcggcgagcagattgatgtgcctgtattt
tccatcgaagagcaagacgccatgaaggctgcgcttggtggtcttgaagctgccaaagcc
ggggcgaaagatgttgtgatcgttgacaccgccgggcgtttgcagatcgacgaagcgatg
atggccgaggctgaagcgctcaaaaaccgcctcagtcctgacgagcttttattcgtcgtc
gattcaatgatgggccaggaggcggtgaacaccgccaaggcgttcaacgatcgacttgat
ttcgatggcgttgtgctcaccaagcttgatggcgatgcacgtggtggtgccgctctgtcg
atccgccaggtggtcgaaaagccgatcaagttcatgagcgtcggcgagaaggtcgatgat
ctcgacgtgttctacccggatcgcatggcccagaggattctcggcatgggcgatatcgtc
agctttgtcgaaaaggcccaggaggcgctcgatcttgaaaagacgatggcgatgcagtcg
aagctcatgaagaacgagttcgaccttgacgactttttcgatcagctccagcagctcaaa
aaaatgggttcgatccagggtctcatcgaaatggtacccggtctgaacaagatggtgccg
aagcaggatctcgaaaacatcaacttcaagcccattgaggcgataatctcctcgatgacc
aaacaggagcgcaagcaccctgaaataatcaacggcagccgccgcaagcgtatcgcgctt
ggcagcggcacgagggtgcaagaggtcaatatgctgctcaagcagtttgccgaaatgaag
aaaatgatgcgctcggtgaatcgcctggccaagtcaggccgcaagatcaccacggagaac
cttgcactcgacaagtttctgaaacgataa
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