Chlorobaculum tepidum: CT1529
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Entry
CT1529 CDS
T00088
Symbol
nifA
Name
(RefSeq) nitrogen fixation specific regulatory protein NifA
KO
K02584
Nif-specific regulatory protein
Organism
cte
Chlorobaculum tepidum
Pathway
cte02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CT1529 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cte03000
]
CT1529 (nifA)
Transcription factors [BR:
cte03000
]
Prokaryotic type
Helix-turn-helix
Other families
CT1529 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
HTH_50
AAA
AAA_2
Mg_chelatase
nSTAND3
AAA_3
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
1007064
NCBI-ProteinID:
NP_662414
CyanoBase:
CT1529
UniProt:
Q8KC95
LinkDB
All DBs
Position
1432952..1434574
Genome browser
AA seq
540 aa
AA seq
DB search
MLIAQEQEQSSISLLAEVSRAVNNEEDISKVLRLVLFILSEHMNMLRGMVTILNRTTGEM
VINESFGLTDEQRQLARYKVGEGIIGQVVKTGRPSVVPRINEEPLFLDRTQSRAEENKEE
LCFICVPIKVGREVIGTLSADRRISVPAENGDKKLWRKSDRIDVLQYYVDLLSIIAAMIA
QAVRIKQLDDEKSIDGAHERTGTPALGFQIIDREIEEELPETERPANIIGNAKPMMSLFK
MIDKISKTSATALILGESGVGKELVANAIHFKSMRNGKPFIKFNCAALPESIVESELFGH
EKGAFTGASAQRRGRFELADGGTLFLDEVGELSLPTQAKLLRIIQEKEFERVGGSKTIKT
DVRIIAATNRNLEEQIQKGNFREDLYYRLNIFPITVPPLRERKTDILLLADYFVEQFNKT
NHKGVRRISTTAIDMLMRYHWPGNVRELQNCIERAVILSEDNVIHGYHLPPSLQTAESSG
TPYTGDLQQKLDAIEKEMIIEALKRTKGNMTKAAIQLGLSDRIMGLRMKKFNIDYRKFRA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgctcaggaacaggaacagagcagcatcagtctactcgccgaggtcagcagg
gccgtcaacaatgaggaggacatcagcaaggtgctccggctggtgcttttcatcttgtca
gaacatatgaacatgctcagaggcatggtcaccattctgaaccgcactaccggcgagatg
gtcatcaacgaatcgttcggcctgaccgacgagcagcgtcagcttgcccgctacaaggtt
ggcgaaggcatcatcggccaggtggtcaaaacgggacgcccctccgtcgtgccccgcatc
aatgaagagccgctttttctcgaccgcacccagtccagagccgaggaaaacaaggaggag
ttgtgcttcatctgcgtgcccatcaaggtgggacgcgaggttatcggcacactgagcgct
gaccggcgaatttccgttcccgctgaaaatggcgacaagaagctctggcgcaaaagtgac
cggatcgatgttctgcagtactatgtcgatctgctctcgatcattgcggccatgatcgcc
caggcggttcgcatcaagcagctcgatgacgaaaagagcatcgatggcgcacacgaacga
accggtacccctgcactgggcttccagatcatcgatagagaaatcgaagaagagttgccc
gaaacggaacggcccgccaacatcatcggaaacgccaagccgatgatgtcgctcttcaag
atgatcgacaaaatctcgaaaaccagcgctacggccctgattctcggcgaaagcggcgtc
ggcaaggagctggtggccaacgccatccacttcaaaagcatgaggaatggcaagccgttc
atcaagttcaactgcgcggcgctgccggaaagcattgtcgaaagtgagctgttcggccat
gaaaaaggagccttcaccggcgcctcggcacagcggcgcgggcgcttcgagcttgccgac
ggcggcacgctttttctcgacgaggtcggcgagctgagcctgccaacgcaggccaagttg
ctgcgaatcatccaggagaaggagttcgagcgggtcggcggatcgaaaaccatcaaaacc
gacgtgcgcatcatcgcagccaccaaccggaacctcgaggaacagatccagaaaggcaac
ttccgcgaggatctctactaccgactcaacatcttcccgatcaccgtgccgccgcttcgc
gagcgcaagacggatattttgctgctggcggactatttcgtggagcagttcaacaagacc
aaccacaagggtgtgcggcggatttcgaccacggccatcgacatgctgatgcgctaccac
tggcccggcaacgtgcgcgagttgcagaactgcatcgaacgcgcggtgattctgagcgag
gacaacgtcatccacggctaccacctgccgccgtcgctccagaccgccgagtcaagcggc
accccctacaccggcgacttgcagcagaaactcgacgccatcgagaaggagatgatcatc
gaagcgctcaaacgcaccaaaggcaacatgaccaaagccgccatccaactcggcctgtcg
gacaggatcatgggattaaggatgaagaaattcaatatcgactaccggaaattccgggcg
tga
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