Chlorobaculum tepidum: CT1606
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Entry
CT1606 CDS
T00088
Name
(GenBank) DNA polymerase III, delta subunit, putative
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cte
Chlorobaculum tepidum
Pathway
cte03030
DNA replication
cte03430
Mismatch repair
cte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CT1606
03430 Mismatch repair
CT1606
03440 Homologous recombination
CT1606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cte03032
]
CT1606
03400 DNA repair and recombination proteins [BR:
cte03400
]
CT1606
Enzymes [BR:
cte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CT1606
DNA replication proteins [BR:
cte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CT1606
DNA repair and recombination proteins [BR:
cte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CT1606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_16
TetR_C_22
AAA_22
Mg_chelatase
Rad17
Motif
Other DBs
NCBI-ProteinID:
AAM72831
UniProt:
Q8KC20
LinkDB
All DBs
Position
1513030..1514202
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AA seq
390 aa
AA seq
DB search
MSWNSIVGHEPQLRVLKTALGANRLAHAYLFTGPEGSGKESVAFELAKILNCRSSGNLSG
EGSCGECESCRQTDLLMHPNIEYLFPVEAALLETIDPSKKENKKLTEARERYEALLDEKR
KNPFFTPAMERSMGILTEQVVMLQQKASLAPRDGGKKVFIISQAERLHPTAANKLLKLLE
EPPAHVVFILVSSRPESVLPTIRSRCQLLNFARPRPAEIEAWIARRAPQLDKTERHFIVS
LSRGNLCSALELIEAETGEGAAPAVVGIRNKAIDYLRNILVPAKFHEAIGTCEELAKSST
RTEQLIFLDALLLFFQDVTRRSIDHAFPELNNPDIAANTDRFVKAFPNRDLYRASTAIEE
AMRSINRNASVLLVMAGLTAELRGILQGKR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaattcgattgtcggtcacgaaccacaactccgggtgctgaaaacagcgctc
ggagccaaccgtttggctcatgcctatctctttaccggtcccgagggctcaggcaaggag
agcgtggcgtttgaactcgccaaaattctcaactgccggagctccggcaacctttcgggc
gaaggctcgtgcggcgaatgcgaaagctgccgccagaccgacctgctcatgcaccccaac
atcgagtacctcttccccgtcgaagcagccctgctcgaaaccatcgatccgtcgaaaaaa
gagaacaagaagctcaccgaagctcgggagcgctacgaggcgctgctcgacgaaaagcga
aaaaatccattcttcacgcccgctatggagcgttcgatgggcatcctgaccgagcaggtg
gtgatgttgcaacagaaggcctcgctcgccccgcgcgacggcggcaaaaaggtgttcatc
atctcacaggccgagcgactccacccgaccgcggccaacaagctcctcaagctgctcgaa
gagccaccggcgcacgtcgtgttcattctcgtctcgtcgcggcccgaatcggtgctgcca
acgatccgctcgcgctgtcagctcctgaacttcgcccgcccgcgcccggcggagatcgag
gcgtggatcgcccgacgcgctccgcagctggacaaaaccgaacgccacttcatcgtgagc
ctctcacgcggcaacctttgcagcgcgcttgaactgatcgaagccgaaaccggcgaagga
gctgccccggcggtggtcggcatccgcaacaaagccatcgactacctccgcaacatcctc
gtgcctgcgaagttccacgaagccatcggcacgtgcgaagagctggccaaaagctccacg
cgcacagaacagctcatcttcctcgacgccttgctgctcttcttccaggacgtcacccgc
cgaagcatcgaccacgcctttccggagctcaacaaccccgacatcgcggcaaacaccgac
cgcttcgtcaaagccttcccaaaccgcgacctctaccgtgcctcaacggccatcgaagaa
gccatgcgctccatcaaccgcaacgccagcgtgctcttggtgatggccggtttaacggcg
gagttaagaggaattttgcaggggaaaaggtaa
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