Chlorobaculum tepidum: CT1649
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Entry
CT1649 CDS
T00088
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cte
Chlorobaculum tepidum
Pathway
cte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CT1649 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cte03019
]
CT1649 (pnp)
03016 Transfer RNA biogenesis [BR:
cte03016
]
CT1649 (pnp)
Enzymes [BR:
cte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CT1649 (pnp)
Messenger RNA biogenesis [BR:
cte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CT1649 (pnp)
Transfer RNA biogenesis [BR:
cte03016
]
Prokaryotic type
tRNA degradation factors
CT1649 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_KhpA-B
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
AAM72874
UniProt:
Q8KBY3
LinkDB
All DBs
Position
1559399..1561600
Genome browser
AA seq
733 aa
AA seq
DB search
MFIKKKIDLGHGKVITIETGKMAKQADGSAVVTMNDTMVLATVVSSKTPPSPNQDFFPLQ
VEYREKYSAAGKFPGGFFKREGRPSEKEILSARLIDRALRPLFPDGYYQETQIIISVISS
DTINDADVLGGIAASAAIMVSDIPFANPMSEVRVGRINGLFIVNPDINELAQSDMDICIG
GTEDTICMLEGEMKEISEAEMLDAIKFGHDAIKKICALQRELAAEVAKPKRPFSPTVAPD
ELVNFVEEHCSAELKALAYTPLAKEERAEKTKAIYTQTIRKTLTHFTDRVGPDQIEADPT
SAFCLNEHMIEECIHAVEKKVMRHMILDDGKRLDGRTLEQVRPISIELGLIPRAHGSALF
TRGETQALVTLTLGTKKDAQSVDTLTDDKDKRFMLHYNFPPFSVGEIGRVGGAGRREIGH
GNLAERAIKMVMPSEQEFPYTVRLVSDILESNGSSSMASVCGGTLAAMDGGIPLKKPVSG
IAMGLIKEGDRYAVLSDILGNEDHLGDMDFKVAGTRDGITACQMDIKIDGLDYHILETAL
EQARKGRLHILDVMAEAIPESRADIGKYAPRLTTIQIPVDAIGMVIGKGGETIRSITEET
GAEINIDDDGTVTIACSSPEATKAAVETIKTLVSKPEVGTIYMGKVRDIRDELGAFVEFL
PKTDGLVHISEIARERIAKVSDVLKVGDRIKVKLIDVRKDPRTGKTKFALSIKALLDTDQ
QAETNGEAKPARD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtttatcaaaaaaaagatcgatcttggacacggtaaggtaatcacgatcgaaaccgga
aaaatggccaaacaggccgacggctcggcggtcgtcacaatgaacgacaccatggtgctc
gccacggtggtttcaagcaaaacacctccgtcgccgaatcaggacttcttcccgctccag
gtcgaataccgcgaaaaatattccgcagccggcaagttccccggaggcttcttcaagcgc
gaaggccgcccctccgaaaaggagattctctccgcccgcctgatcgaccgcgccctgcgc
ccgctcttccctgacggttactatcaggagacccagatcatcatctcggtcatctcctcc
gacacgatcaatgacgccgacgtgcttggcggcatcgccgcttcagccgccatcatggtc
tccgacattccgttcgccaacccgatgtccgaggttcgcgtcgggcgcatcaacggactc
ttcatcgtcaaccccgacatcaacgagctggcgcaaagcgacatggacatctgcatcggc
ggcaccgaggacaccatctgtatgctcgagggcgagatgaaggagatctccgaagccgag
atgctcgacgccatcaaattcggccacgacgccatcaagaaaatttgcgccctccagcgc
gaactcgccgcagaggtagccaagcccaaacggccattctctccgaccgtcgcgccggac
gagctggtcaatttcgttgaagagcactgctcagccgagctgaaagctttggcctacacc
ccgctcgccaaggaggagcgcgccgaaaagaccaaagccatctacacgcaaaccatcagg
aaaaccctcacgcacttcaccgaccgcgtcggccccgatcagatcgaagccgatcccacc
agcgcgttctgcctgaacgaacacatgatcgaagagtgcatccatgccgtcgaaaagaag
gtgatgcgccacatgattctcgatgacggcaagcgcctcgacggccgtacactcgaacag
gttcgcccgatcagcatcgagctgggcctcattccgagggctcacggttcagcgctcttc
actcgcggcgaaacgcaggcactcgtcacgctgacgctgggcaccaagaaggacgcccag
tcggtcgatacgctgactgacgacaaggacaagcggttcatgctgcactacaacttccca
cccttctcagtcggcgaaatcggcagggtcggcggtgccggacggcgtgaaatcggccac
ggcaacctcgccgagcgcgccatcaaaatggtgatgccatccgagcaggagttcccctac
accgtgcgcctcgtctcggacatcctcgaatcgaacggttcgtcctcgatggcctcggtc
tgcggcggcacgctggccgcgatggacggtggcattccgctcaagaaaccggtctccggc
atcgcaatgggcctcatcaaggagggcgaccgctacgccgtgctctccgacattctcggc
aacgaggatcatctcggcgacatggacttcaaggtggcaggcacccgtgacggcattacc
gcctgccagatggacatcaagatcgacggcctcgactaccacatcctcgaaaccgcgctc
gagcaggctcgcaaaggtcgcttgcacatcctcgacgtcatggccgaggcgattcccgag
tcgcgtgcagacatcggtaaatacgcaccgcgcctcaccaccatccagattccggtggac
gccatcggcatggtgatcggcaagggcggcgaaaccatccgcagcatcaccgaggagacc
ggcgcagagatcaacatcgacgacgacggcacggtcaccatcgcctgctccagccccgaa
gccaccaaagcggcggtcgaaaccatcaagaccctcgtctccaagccggaggtcggcaca
atctacatgggcaaggttcgcgacatccgcgacgagctcggcgccttcgtcgagttcctg
ccaaaaaccgacggtctggtgcacatctcggagattgcccgcgaacgtatcgccaaggtg
agcgacgtgctcaaggtgggtgaccggatcaaggtgaagctgatcgacgtgcgcaaggat
ccccgcaccggcaagaccaagttcgccctctcgatcaaggcgctactcgacaccgaccag
caagccgaaacgaacggcgaagcaaagccggcaagagactga
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