Chlorobaculum tepidum: CT1667
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Entry
CT1667 CDS
T00088
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cte
Chlorobaculum tepidum
Pathway
cte03030
DNA replication
cte03410
Base excision repair
cte03420
Nucleotide excision repair
cte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CT1667 (polA)
03410 Base excision repair
CT1667 (polA)
03420 Nucleotide excision repair
CT1667 (polA)
03440 Homologous recombination
CT1667 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cte03032
]
CT1667 (polA)
03400 DNA repair and recombination proteins [BR:
cte03400
]
CT1667 (polA)
Enzymes [BR:
cte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CT1667 (polA)
DNA replication proteins [BR:
cte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CT1667 (polA)
DNA repair and recombination proteins [BR:
cte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CT1667 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CT1667 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AAM72892
UniProt:
Q8KBW5
LinkDB
All DBs
Position
1575395..1578247
Genome browser
AA seq
950 aa
AA seq
DB search
MTSENQIGLFDAPVSEPKPAATPQKSPADAEKTKPGLFLLDGMALVYRAFYALQQARMST
RDGVPTGAVFGFATSLLRIIEEYRPDYLAVAFDSPEKTFRHEKYKAYKANRPAPPDDLIN
QLDNIRELIRACGIPLIIMPGFEADDLIGTTARKFEADCQVFIVTPDKDMSQLVHDGVRI
LKPGKKQNEFELLGSREVAEQFGAPPEQFIDLLTLTGDTSDNIPGAKGIGPKTASSLLKK
YGSLEGIYANIDALTPKTRQSLEAFREMMPLVRELVTIRTDLDLPLTLEALHASKPDPEA
LFALLAKLELKSIAARLPAVLQIDTSAASSSENAPAMANSVDPGDPQLIPAGEGSEYHLI
DSKEAFDKLLTLLENSGGFAVDTETTSLDTFTAELAGISCSVKPGEAFFVYFGTPGLDAK
TTVARLKPLLENPEIPKTGQNLKYDILVLKKYGVELAPVGFDTMLASYVLNPEARHNLDD
MAALYLGRQTTKYTELVGTGKQTIGIFEVEPRKLSDYACQDADIALRLRYSLEEQLEKTP
ELLEVCRKLEFPLVRVLADMEHKGISIDTAHLEQLSIKVTGELATLTERIFEATGETFNI
DSPKQLGHILFDVLKLPAKKATKTGYSTNVQVLEELAMLHPVASDLLEYRSLQKLKSTYI
EALPKMINPLTGRVHTSFNQSITATGRLSSSNPNLQNIPIRTELGKEIRRAFIPSNPGNL
LLSADYSQIELRIAAELSGDPMLIEAFRNHEDIHAATARVIFDTKEITPDMRRKAKEVNF
GVLYGIQPFGLSQRLGIPQKEAKEIIDTYMAKYPGMFSSLQTIIEEAKKKGYVTTLMGRR
RYVPDLNSANSNIRKAAERVTMNTPIQGTAADIIKFAMCSISRELKKGEFRSAMLLQVHD
ELLFEMPPDEEARLREMVERNMIEAASKCGLKNVPVEVDTGSGKNWLEAH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgaaaaccagatcggcctgtttgacgctccagtatcagaaccgaaaccggca
gcaacaccgcaaaaaagtccggcagatgcagagaaaaccaagccgggacttttcttgctt
gacggcatggcgctggtctatcgcgccttctacgccttgcagcaggcacgaatgagcacg
cgcgacggcgtgccaaccggcgcggtgttcggcttcgccaccagcctgctcaggatcatt
gaggagtaccggccggactaccttgccgtagcgttcgacagccctgaaaaaacctttcgc
catgaaaagtacaaggcgtacaaagccaaccgccccgccccgccggacgacctcatcaac
cagctcgacaatatcagggaactgatccgggcgtgcggcattccgctgatcatcatgccc
ggcttcgaggcggacgacctgatcggcacgacagcgcggaagttcgaagccgactgccag
gtcttcatcgtcacgccggacaaggatatgtcgcagcttgtgcacgacggagtacgcatc
ctcaagcccggcaagaagcagaacgaattcgagctgctcggcagccgcgaggttgccgag
cagtttggcgcgccgccggagcagttcatcgacctgttgacgctcaccggcgacacttcg
gacaacatccccggagcgaagggcatcggcccgaaaaccgcctccagcctgctcaaaaag
tacggctcgctcgaaggcatctacgccaacatcgatgccctcaccccaaagacgcgccag
agcctcgaagcgttccgcgagatgatgccactggtgcgggagctggtgacgatccgcacc
gatctcgacctgccgctcaccctcgaagcgctacacgccagcaagcccgatcccgaagcg
cttttcgcgcttctcgcaaaactggagctgaagagcatcgccgcccggctgcccgccgta
ttgcagatcgatacctccgctgcttcgtcttccgaaaacgcgccagcaatggcgaactct
gtcgaccccggcgatccgcaactgatcccggctggcgaaggctccgaatatcacctgatc
gacagtaaggaggcttttgacaagctcctgacgctgctcgaaaactccggaggttttgcg
gtcgataccgaaaccacgagcctcgacacctttacggcggagctcgcgggcatctcctgt
tcggtcaaacccggtgaagccttcttcgtctatttcggcacaccgggtctcgacgccaaa
acgaccgtcgccagattgaaaccgcttcttgaaaatcccgagattcccaaaacgggccag
aatctgaagtatgacatcctcgtgctgaagaagtatggcgtggaactggctccggtcggg
ttcgacaccatgctcgcaagctatgtgctcaatcctgaagctcgccacaacctcgacgac
atggccgcgctgtacctcggacggcagaccaccaagtacaccgagctggtcggcacgggc
aagcagaccatcggtatcttcgaggtcgagccgcgcaagctctcggactacgcctgtcag
gacgccgacatcgccctcaggctccggtactcgctcgaagagcagctcgaaaaaacgcct
gaactgctcgaagtgtgccgcaagctcgaattcccgctggttagggtgctggccgatatg
gagcacaaggggatctcgatcgacacagcgcacctcgagcagctttccatcaaagtcacc
ggtgaactggccacgttgaccgaacgaatcttcgaagcgacgggtgagacattcaacatc
gactcgccgaagcagctcggccatatccttttcgatgtgctgaagctacccgcgaaaaag
gccaccaaaaccggttactcgaccaacgtgcaggtgctcgaagagctggcgatgctgcat
cccgtcgcctccgacctgctggaatatcgcagcttgcaaaagctgaaaagcacctacatc
gaggcgctgccgaagatgatcaatccgctgacaggcagggtgcacacctcgttcaaccag
tcgatcacggccaccggacgactctcgtcatcgaatccgaatttgcagaacatcccgatc
cgcacagagcttggcaaggagattcgccgcgcctttataccgtcaaatcccggcaacctt
ctgctctcggcggactactcgcagatcgaactgcgcatcgcggcggagctttcaggcgat
ccgatgctcatcgaagcattccgcaaccacgaggacatccacgcagccacggcccgggtc
atcttcgatacaaaagagataacacccgacatgcgacgcaaggccaaggaggtcaacttc
ggcgtgctttacggcattcagccctttggtctctcccagcgcctcggcattccgcaaaaa
gaggccaaagagatcatcgacacctacatggcgaaatatcccggcatgttctcgtcgctc
cagaccatcatcgaggaggcgaagaaaaaaggctatgtcaccacgctcatgggccgccgc
cgctacgtgcctgacctgaacagcgccaacagcaacatccgcaaagctgccgagcgggtc
acgatgaacacgccgatccagggcacggctgcggatatcatcaagttcgccatgtgttcg
atcagccgcgagctgaaaaaaggggaattccgctcggcaatgttgctgcaggtacacgac
gaactgctcttcgagatgccgccggatgaagaggctcgcctcagggaaatggtcgagcga
aacatgatcgaagccgcctcgaaatgcgggctgaagaacgttcctgtggaggtggatacc
ggctccggaaaaaactggctggaggcccattag
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integrated database retrieval system
