Chlorobaculum tepidum: CT1855
Help
Entry
CT1855 CDS
T00088
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
cte
Chlorobaculum tepidum
Pathway
cte04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CT1855 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cte03016
]
CT1855 (trmU)
Enzymes [BR:
cte01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
CT1855 (trmU)
Transfer RNA biogenesis [BR:
cte03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
CT1855 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
ThiI
NAD_synthase
SCO1-SenC
QueC
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AAM73075
UniProt:
Q8KBD3
LinkDB
All DBs
Position
1754744..1755844
Genome browser
AA seq
366 aa
AA seq
DB search
MSSPQHVIIGLSGGVDSAVAACLLIKQGYHVTGLNIRVLDTPEDTPTLAPSAMRISDSEE
FDFPVFTLNLSAKFARDVVGYFHDDYLAGRTPNPCMVCNKAIKWFGLFEAMRLLRADLVA
TGHYARTELRDAVTRLLKGVDPEKDQSYFLWMLTQAELAKTLFPLGGYTKAEVRELARSF
GVHAAEKKESQEICFVPHDDYCAYLANAIPGLEARVAGGEIVDQAGKVIGHHRGYPFYTI
GQRRGLGVSTGEPVYVTEIDAEHNRIHVGSKADLECRSLIASGMNWIGIATPDKSFEAEA
RIRYRDRQSACMIEPMDDNRAWVSFREPKQGVACGQAVVFYDGDEVLGGGIIAKVNPEAP
PQKILG
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaccacaacacgtcattatcggcctttcgggcggcgtcgattcagcggtagcg
gcttgcctgctcatcaagcaaggctaccacgtgaccgggctgaacatccgcgtgctcgat
acgccggaggatactcccacgctggcgccgtcggcaatgcggatcagtgactcggaggag
ttcgattttcccgtgttcacgctgaacctgagcgcgaagttcgcccgcgacgtcgtcggt
tactttcatgatgactatctcgccggacggacgccgaatccttgcatggtgtgcaacaag
gcgatcaagtggttcgggctgttcgaggcgatgcggctgctcagagccgatctggtggcg
accggccactacgcccgcacggaactgcgtgacgccgtgacgcgccttctcaagggcgtc
gatccggagaaggatcaaagctattttctctggatgctgactcaggcggagcttgccaaa
acgctgtttccgcttggcggttatacgaaagctgaggtgcgagagctagcccggtcgttc
ggcgtgcatgcggcggaaaaaaaggagagtcaggagatctgcttcgtgccgcacgacgat
tattgcgcgtatctggcgaacgcgattcccggcctcgaagcgcgggtggcaggcggggag
attgtcgatcaggcgggtaaggtgatcggccatcaccgcggctatccgttctacaccatc
ggccagcgccgcggcctcggcgtctcgaccggcgagccggtgtatgtgacggagatcgac
gccgaacacaaccgcattcatgttggcagtaaagctgatctcgaatgccgcagcctcatc
gcctccggcatgaactggatcggcatcgccacgccagacaagtctttcgaagccgaagcg
cgaatccgctaccgcgaccggcagagcgcctgcatgatcgagccaatggacgataaccgg
gcatgggtgagcttccgcgagccgaagcagggcgttgcctgcgggcaggcggtggtcttc
tacgacggcgacgaagtgctcggcggcgggattatcgccaaggtgaatcctgaagcgccg
cctcagaagatcttgggctaa
DBGET
integrated database retrieval system
