Chlamydia trachomatis E/C599: EC599_3201
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Entry
EC599_3201 CDS
T03168
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta-prime chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ctec
Chlamydia trachomatis E/C599
Pathway
ctec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EC599_3201 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctec03021
]
EC599_3201 (rpoC)
03400 DNA repair and recombination proteins [BR:
ctec03400
]
EC599_3201 (rpoC)
Enzymes [BR:
ctec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EC599_3201 (rpoC)
Transcription machinery [BR:
ctec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EC599_3201 (rpoC)
DNA repair and recombination proteins [BR:
ctec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EC599_3201 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
CDG43206
LinkDB
All DBs
Position
complement(351160..355350)
Genome browser
AA seq
1396 aa
AA seq
DB search
MFREGSRDDAALVKEGLFDKLEIGIASDVTIRDKWSCGEIKKPETINYRTFKPEKGGLFC
EKIFGPTKDWECYCGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPIVHIWFFK
TTPSRIGNVLGMTASDLERVIYYEEYVVIDPGNTDLVKKQLLNDAKYREVVEKWGKDAFV
AKMGGEAVYDLLKSEDLESLLGELKERLRKTKSQQARMKLAKRLKIVEGFVSSSNRPEWM
VLKNIPVVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR
MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRVDYSGRSVIIV
GPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSAKKMIQRGAPEVWDVLEEIIK
GHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRVHPLVCAAFNADFDGDQMAVHVPLSIEAQ
LEAKVLMMAPDNIFLPSSGKPVATPSKDMTLGIYYLMADPTYFPEEHGGKTKAFKDEVEV
LRALNAGGFILKDEICGSRRDETGRGIHIHEKIKVRIDGQIIETTPGRVFFNTIVPKELG
FQNYSMPSKRISELILQCYKKVGLEATVRFLDDLKELGFVQSTKAAISMGLKDVKIPEIK
KEILKDAYDKVAVVKKQYEDGIITDGERHSKTISIWTEVSDLLSNALYSEIKKQTNSKHN
PLFLMIDSGARGNKSQLKQLGALRGLMAKPNGAIIESPITSNFREGLTVLEYSISSHGAR
KGLADTALKTADSGYLTRRLVDVAQDVIITERDCGTLNHIEVSTIRQGSEELLPLKDRVY
GRTVSENIYQPGDKSNVLACAGDVLTSAQAEAIDDAGIESVKIRSTLTCESRRGVCAKCY
GLNLANGRLIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIVAECDGILVY
LDLRVVVDQEGNNLVLNKMGALHLVQDEGRSLSEYKKLLSTKSIESLATFPVELGAKILV
NDGAAVTAGQRIAEVELHNIPIICDKPGFVHYEDLVEGVSTEKVTNKNTGLVELIVKQHR
GELHPQIAIYADANMKELVGTYAIPSGAIISVEEGQRIAPGMLLARLPRGAIKTKDITGG
LPRVAELVEARKPEDAADIAKIDGVVDFKGIQKNKRILVVRDEITGMEEEHLISLTKHLI
VQRGDSVIKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDINDKHIEIIV
RQMLQKVRITDPGDTTLLFGEDVDKKEFYEENRRTEEDGGKPAQAVPVLLGITKASLGTE
SFISAASFQDTTRVLTDAACSSKTDYLLGFKENVIMGHMIPGGTGFDTHKRIKQHLEKEQ
EDLVFDFDSEFESLAG
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgttcagagaaggttctcgagacgatgcagctctggtaaaagaagggctgtttgataag
ttagaaattgggattgcttcagatgtgactattcgcgacaagtggtcttgtggcgaaatt
aagaaaccggagacgatcaactaccgtacatttaaacctgaaaaaggcggtttattctgc
gaaaagatttttgggcctactaaggactgggaatgttattgcggtaaatataagaagatc
aaacataaaggaattgtgtgtgatcgctgtggagtagaggtcacactttccaaagtgcga
cgagaaagaatggctcatattgagttagccgttcccattgttcacatatggttcttcaaa
acaactccttcaagaatcgggaatgttttaggaatgaccgcttcggatttggagcgtgta
atttattacgaggaatatgttgttatcgatccaggtaatactgatctcgtgaagaaacaa
cttcttaatgatgcgaaatatcgagaagttgttgaaaaatggggtaaagatgctttcgtt
gccaaaatgggaggagaggctgtttacgatcttctcaaatctgaagatttggaaagcctt
ttaggagagctcaaagagcgtttaagaaaaacgaaatctcagcaagcgagaatgaagctg
gctaaacgtctgaagatcgtggaaggttttgtatcttcttcgaaccgtcctgaatggatg
gtattgaaaaacattcctgttgttcccccagatttacgtcctttagttcctttagatggt
ggacgttttgctacttcggacttaaatgatctgtatcgtagagttattaaccggaataat
cgcttaaaagctattttgcggctaaaaactccagaggtcattgtccgtaacgagaagcgg
atgttgcaggaagctgttgacgctttgtttgacaatggacgtcacgggcatcctgttatg
ggagctggaaatagacctctgaagtctttgtcagagatgttgaaagggaaaaacggacgt
ttccgacagaatttgttaggtaaacgagtggattactccggacgttcagtgattattgtt
ggtcctgaattgaagtttaatcagtgcggtttgcctaaggaaatggctctggaattgttt
gagccatttattatcaaacgattaaaggatcagggtagtgtttatactattcgttcagca
aagaagatgattcagcggggagctccagaagtttgggatgttcttgaagaaataattaaa
gggcatccagttttactaaaccgagctcctactttgcaccgattagggatacaggctttt
gagccagtattgattgaagggaaggctattcgggtccatcctctggtatgtgcagcgttc
aatgctgactttgatggagaccaaatggctgttcacgtgcctctctccatcgaggcgcag
ttagaagctaaggttttgatgatggctccagacaacattttcttgccatcttctgggaaa
cctgttgcaactccttctaaggacatgacattgggtatctattatttaatggctgatcca
acctacttccctgaagaacatggagggaaaacaaaagcatttaaagacgaagtagaagtg
cttcgagctctgaatgctggagggtttattctgaaggatgagatctgtggttctcgtcga
gatgaaactggacgagggattcatatccatgagaaaattaaagttcgaatagatggtcag
attattgaaacaacgcctggtcgtgtatttttcaataccatcgttcctaaagaactcggt
ttccaaaactatagcatgccaagtaagcgtatcagtgaattgattctgcagtgctataag
aaagttgggttagaagctactgtacgcttcctagacgatctcaaagaattaggctttgta
caatctacgaaagctgcgatttccatgggtctgaaggatgttaagattcctgaaatcaaa
aaagaaatcttaaaagatgcttacgataaagtggctgttgttaagaagcagtacgaggac
gggattattactgatggggaacggcattccaaaacgatcagtatttggactgaagtctca
gacctcttgtcgaatgctttgtactctgagatcaagaaacaaacaaatagcaaacacaat
ccgctattcttgatgattgattctggagctcgaggaaataaatctcagttgaaacagttg
ggtgctttacggggactgatggctaaaccaaacggagccattatcgaatctccaattact
tcaaacttccgagaaggtttaactgttctagagtactctatttcttctcacggagctaga
aagggattggcagataccgcgcttaaaacagcggattccggatatttgactcgtcgttta
gtagacgtcgctcaggatgtcattattactgagagagattgtggtactttaaatcatatc
gaggtatcgacaatccgtcagggttctgaagaactgctgcctctaaaagatcgtgtttac
ggacgtacggtttccgaaaacatttatcagcctggtgataagagcaacgtcttagcgtgt
gccggcgatgtattaacttctgctcaagctgaagctattgatgacgctggtattgaaagt
gtgaagattcgttccactcttacttgtgaaagtcgtcgaggagtatgtgctaaatgctac
ggtttgaatctcgctaatggtcgtttgattggattaggagaagctgttggtattatcgca
gcccaatccatcggggaacctggaactcagttaacaatgagaacattccaccttggaggg
attgctgcgacatcctcaactccagagatcgttgccgagtgcgatgggattcttgtttac
ttagatttgcgtgttgtcgtagatcaggagggtaataatcttgtgcttaacaagatggga
gctcttcacttagttcaagacgaaggacgaagcttaagtgaatataagaaacttttgagt
acgaagtctattgaaagtttggcgacattccctgtggaattaggagctaagattttagtt
aatgatggtgctgctgttacagcaggacagagaattgctgaggtagagcttcataacatt
ccaattatctgtgataagccaggattcgttcattacgaagatttggtagagggagtctcc
acagagaaggtcacgaataagaatactgggcttgttgagttaatcgtaaaacagcacaga
ggggaattgcatcctcagatcgccatatacgctgatgccaatatgaaagagttggtcggt
acgtatgctattccttctggagcgattatctccgtagaagagggtcaacgtatcgctcca
ggaatgctcttagcgagattgccccgaggggccatcaagactaaagatattactggaggt
ttgccaagggttgccgagttagtagaagctcgtaagcctgaagatgctgctgatatcgct
aagattgatggggttgttgacttcaaaggcattcagaagaacaagcgtattcttgttgtc
cgagatgagattacgggaatggaagaggaacatttgatttctctaaccaaacacttaatc
gtacaacgaggagacagcgtaatcaaaggtcagcagttgacggatggtttagttgttcca
catgagatccttgagatttgtggtgttagagagcttcagaaatatttagttaatgaggtt
caagaagtataccgcctacaaggggtggacattaacgacaaacacatcgaaattattgtt
cgtcagatgttgcagaaagttcgtattactgatccaggtgatacgacgttattgtttgga
gaagatgtcgataagaaagagttttatgaagagaaccgtcgcacggaagaggatggaggg
aaacctgctcaagctgttccagtgctgttgggaatcactaaagcttctttgggaactgag
tcctttatttctgccgcttcgttccaagatacaactcgggtcttaacagacgctgcttgc
agtagtaagacagactatctgttaggattcaaagagaatgtgatcatgggacacatgatt
cctggaggtacaggatttgatacgcacaagcgtattaagcagcatcttgaaaaagagcaa
gaagacttagtctttgattttgacagcgagttcgagtctttggcaggttaa
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