KEGG   Corynebacterium testudinoris: CTEST_03270
Entry
CTEST_03270       CDS       T03956                                 
Name
(GenBank) DNA/RNA helicase, superfamily I
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cted  Corynebacterium testudinoris
Pathway
cted03420  Nucleotide excision repair
cted03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cted00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CTEST_03270
   03430 Mismatch repair
    CTEST_03270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cted03400]
    CTEST_03270
Enzymes [BR:cted01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CTEST_03270
DNA repair and recombination proteins [BR:cted03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CTEST_03270
   MMR (mismatch excision repair)
    Other MMR factors
     CTEST_03270
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AKK08109
UniProt: A0A0G3H418
LinkDB
Position
652108..655326
AA seq 1072 aa
MPNAISPELLSKVLGQEHTPTKQQSDIIGADPGPLLVVAGAGAGKTETMAARVVWLIANQ
IVTPDQILGLTFTRKAAQELSARIRGRLQTLAGTPKIRDLDPSGTLADDVVNLTPTVSTY
DAYAAQLVREYGLLVPVEPASRMITAAELHGIAYQVVKDYRGRHSATGQAGTVTERLLRL
ITDMGNSLATPEDVIEESRAFIKELESLPPYGKKPPEYFTKDQQRWMKAQQERIDQFPLV
EQLQQELANLRVTTFNEQMSVAARLASTHASVGQSQRRRFKVVMLDEYQDTSHSQRVLLT
SLFGGHTDVTVTAVGDPMQAIYGWRGATSANLKEFVHDFPLDPATGTPAPKRQLTTSWRN
PAEVLTLANHVSDQLLGRGPDRPVEELTPRDGAPQGHVSIGYFATAEDEVNAVADLLNEQ
YLRSQGEKFTAAVLVRKNKHTAEIARALEHRGVPYEVFGLGGLLSLPEIADLVAIATMLI
RPQNTPAALRILAGPSVGLGLADLVALRDRARNLTAGADNDQRRLRLGEDVLPEDRLRAQ
VDAILADPPEQIAGLTDAVADLGERSRYSAEGVRRLEMLSSRLRALRTHSLSKSLPDLFG
DIVEVFGIRTEVLARPNTVGPVHLDAFLDSVASYPGDSLAGLLDYFELARQHEDGLAPGD
AVVKEDRVQIMTVHKAKGLEWGTVSVLHADKNTYRGNTETFLTQSSRVPDAEVDTSEAEN
RSQFSKLFEEYREEKKAELAEENARLFYVALTRAEHNLIITASPSGQRPGPYEHLEGLKG
LNDTKDKVTVDVLAWEVGEGDVDKQPAEPAETGTFPYLRAEPNAVAGAELVRAAMDELPP
LTPGETFDFWERETAALIEEQEALLAPTVEVELPGELTASDLVALRSDAQQFAKRQRRPV
PFKPNTFAKRGTAFHQWLEDRFGATALLDEDELPGIDEENVDSAELDDLKEAFARSEWAE
RTPEQVEQPFEVSIGDTVVRGRMDAVFRDPDDPDGWMIVDWKTGRKPTGEDRQAAIIQLA
VYREAWARITGTTEPIRAAFHYVATGETFEPRDLPDRARLEALLVSSTGGND
NT seq 3219 nt   +upstreamnt  +downstreamnt
atgcctaatgcgatcagcccggagcttctctccaaggttttggggcaggaacacactccg
accaagcaacagtccgacatcattggcgccgacccagggccactgctcgtcgtggctggt
gccggtgcgggcaaaaccgagacgatggccgcccgcgtggtctggttgattgcgaaccag
attgttactcccgaccagattctgggattgacgtttacccgcaaggccgcccaggagctc
agcgcccgcatccgcggtcggctgcagaccttggcgggaactccgaagatccgtgacctc
gacccgagcggcaccctcgccgatgatgtggtcaacctcacgccgaccgtttccacctat
gacgcctacgccgcacaactggtccgggagtacgggctcctcgtgccggtcgagcccgcc
agccggatgatcactgctgcggagctccacggcatcgcctaccaggtggtcaaggattat
cgcggtcggcattccgccaccggccaggcggggacggtcaccgagaggctgctcaggctc
atcaccgacatgggcaacagcctggccaccccggaagacgtcatcgaggaatctcgcgcg
tttatcaaggagctggaatccctaccgccgtacggcaaaaagcccccggagtacttcacc
aaggaccagcagaggtggatgaaggcgcagcaggagcgcatcgatcaattccccctcgtg
gagcagttgcagcaggaactggcgaacctgcgggtgaccaccttcaacgagcagatgtcg
gtggcggcccgcctcgcgtcaacgcatgcctcggtggggcagtcccagcgccggcgcttc
aaggtcgtcatgttggacgaataccaggacacctcccattcccagcgggtgttgttgacc
agcctcttcggcgggcacaccgatgtcacagtcaccgccgtcggtgatcccatgcaggcg
atctacggctggcgcggggctacctctgccaacctcaaggaatttgtccacgatttcccc
ctcgatcccgccacgggcacaccagcgccgaaacgccagctgaccacctcctggcgcaac
cccgccgaagtgctcacactggccaaccacgtcagtgatcagctcttgggcaggggcccc
gatcgccccgtggaggagctgacaccgcgggatggggcaccgcaagggcacgtatccatc
ggctacttcgccaccgccgaggatgaagtcaacgccgtcgccgacctgctcaacgagcag
tacctgcgctcgcagggcgagaagttcaccgccgccgtgctcgtgcgcaagaacaaacac
accgccgagatcgcccgcgccctggaacaccggggagtgccctacgaggtgtttgggctc
ggcggattgctgtcgctgccggagattgctgatcttgtggctattgccaccatgctcatc
cggccgcaaaacactccggcggcgttgaggatcctcgctggccccagcgtggggctcggc
ctggccgatctcgttgccctgcgtgaccgcgcccgcaatctcaccgccggggcggacaac
gatcaacgccgactccgcctgggagaggacgtgctgccggaagatcggctgcgcgcccag
gtcgacgcgatcctggcggacccgccggagcagatcgccggcctgaccgacgcggtggcg
gacctgggtgagcgttcccgctactccgccgagggcgtccgccgcctcgagatgctgagc
agccggttgcgcgccctgcgcacgcacagcctgagcaaatccctgcccgacctgttcggt
gacatcgtcgaggtcttcgggattcgcacggaggtgctggcacggccgaacacggtgggc
cccgtgcacctcgatgccttcctcgactcggttgcctcctatcccggggacagcctcgcc
ggattgctcgactacttcgagctggcccgccaacacgaggatggcctcgcgccgggtgac
gccgtggtcaaggaggaccgcgtgcagatcatgaccgtccacaaagccaagggcctggag
tggggcacggtcagcgtcctccacgccgataagaacacctaccggggtaatacggagacg
tttctcacccaatcttcccgcgtgcccgacgccgaggtggacacgagcgaggcggagaac
cgctcccagttttccaagctctttgaggaataccgggaagaaaagaaagccgagctggcg
gaggagaatgctcgcctgttctacgtggccctcacgcgagccgaacacaacctcatcatc
acggcctctcccagtgggcaacggccgggaccctatgagcacctggaaggcctgaaaggc
ctgaacgacacgaaagacaaagtcacagtggatgtgttggcctgggaggtgggggagggg
gacgtcgataagcaaccggcggagccggccgagacggggacattcccctacctccgcgcg
gagcccaacgcggtggcgggcgcggagttggtgcgggcggcgatggatgagctgccgccg
ctcaccccgggtgagactttcgacttctgggagcgggaaacggccgcgctcattgaggag
caggaggcgttgctcgccccgacggtggaggtggaactacccggcgagctcacggcctct
gacctggtggctctgcggtcggatgcgcagcaatttgcaaagcgccaacgccgcccggtg
ccattcaagccgaatacctttgccaagcggggcacggccttccaccagtggttggaggac
cgcttcggcgcgacggcgctgctggatgaggatgagctgccgggcatcgacgaggagaac
gtcgattcggcggaactggatgatctcaaggaggctttcgcccggagcgagtgggccgaa
cggacaccggagcaggtggagcaacccttcgaagtgagcatcggcgataccgtcgtgcgc
gggcgaatggacgcggtattccgggaccctgatgacccggacgggtggatgatcgtggac
tggaagacaggccgaaagccgacgggcgaggaccggcaggcagccatcatccagctggcg
gtctaccgggaggcgtgggcgcgtatcaccgggacgacggagccgattcgcgcggcattc
cattacgttgccaccggggagaccttcgaaccgcgcgatctgccggatcgggccaggctg
gaggcactgctggtctcatcgaccggtggaaacgactag

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