Corynebacterium testudinoris: CTEST_06025
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Entry
CTEST_06025 CDS
T03956
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cted
Corynebacterium testudinoris
Pathway
cted03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CTEST_06025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cted03400
]
CTEST_06025
DNA repair and recombination proteins [BR:
cted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CTEST_06025
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CTEST_06025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
HEM4
AAA_16
Helicase_RecD
nSTAND3
AIG1
AAA_5
UvrD-helicase
DUF87
UB2H
Motif
Other DBs
NCBI-ProteinID:
AKK08647
UniProt:
A0A0G3HBX1
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All DBs
Position
1225826..1227931
Genome browser
AA seq
701 aa
AA seq
DB search
MWAMAFAAEHPVLSHSEHRPVGEIERSDGRFEVISEYQPAGDQPAAIADLDARLNRGEED
IVLLGATGTGKSATAAWLIEKQQRPTLVMAPNKTLAAQLANELKQLLPNNAVEYFVSYYD
YYQPEAYIAQTDTYIEKDSSINDDVERLRHSATSALLSRRDVVVVSSVSSIYGLGTPQSY
LDRSVVLNVGEEVERDRFLRLLVDIQYERNDIAFQRGTFRAKGDTVDIIPAYEELAVRVE
FFGDEIDALYYIHPLTGDVVRQVEDIRIFPATHYVAGPERMEKAVVAIKAELAERLADLE
NKGKLLEAQRLRMRTEYDLEMIEQVGFCSGIENYSRHIDGRGPGTAPATLIDYFPEDFLT
IIDESHVTVPQIGGMFEGDMSRKRNLVEFGFRLPSAMDNRPLTWEEFEARVGQTVYLSAT
PGKYEMAAAGGEFVEQVIRPTGLVDPKVTVKPTQGQIDDLIHEIRERTSNNERVLVTTLT
KKMAEDLTDYLLENGIKVRYLHSDIDTLQRVELLRQLRLGEFDVLVGINLLREGLDLPEV
SLVAILDADKEGFLRSATSLIQTIGRAARNVSGEVIMYADKITDSMAQAIDETERRREKQ
IAYNTEHGIDPQPLRKKIADILDQVYENNPEAGAPSGGEAAMVERPDTSDMPMEQLQKLI
DDLTAQMGAAARDLKFELAGRLRDEIADLKKEQRGMKDIGM
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccatggcgtttgcagctgaacacccagtcttgtcccactcagagcatcgtccc
gtcggcgagatcgaaagaagcgacgggcgcttcgaagtcatctcggagtaccaacccgcg
ggcgatcagccggccgcgatcgcggacctggacgcccgactcaaccgcggagaggaagac
atcgttctccttggtgctaccggtaccggtaagtcggctacggcggcgtggctgattgaa
aagcagcagcggcccaccctcgtcatggcaccaaataagaccttggccgcgcagttagcc
aatgagctcaagcagttgttacctaacaacgcagtcgagtacttcgtctcctactacgac
tactaccaacctgaggcgtacatcgcgcagacggacacctacatcgagaaggactcctcg
atcaacgatgatgtggagcgcctgcggcactcggccacgtccgcgttgctctcccgccgc
gacgtcgtcgtcgtgtcctcagtgtcgagcatttacggcctgggcactcctcagtcctac
ctcgaccgctcggtggtgctcaacgtgggggaggaggtcgaacgcgatcgcttcctgcgt
ctgctcgtggacattcagtacgaacgcaacgacatcgccttccagcggggcacgtttcgc
gccaagggcgacaccgtcgatatcatccccgcgtacgaggagctggccgtgcgcgtggag
ttcttcggcgacgaaattgatgcgctctactacatccacccgctcaccggcgatgtcgtg
cgccaggtggaggacatccgtattttccctgcgacgcactacgttgctggccccgagcgc
atggagaaagcggtcgtggcaatcaaggccgagttggccgagcgactcgctgacctggaa
aacaagggcaagctgctggaggcccagcgcctgcgcatgcgcacggaatacgaccttgag
atgatcgagcaggtgggtttttgctccggcattgagaactactcgcgccacatcgatgga
cgtggcccaggtaccgcccccgcgaccctcatcgactacttccccgaagacttcctcacc
attatcgacgagtctcatgtcaccgttccgcagatcggcggcatgttcgagggggacatg
tcgcgtaagcgcaacctcgtcgagttcggattccgcttgccctcggctatggataaccgg
ccgctgacgtgggaggagtttgaggcgcgcgttggtcagaccgtgtacctctcggccacg
ccgggcaaatacgagatggcggccgctggtggcgagttcgtcgagcaggtcattcgcccg
accggtctcgtggacccgaaggtgacggtgaagccgacccaaggccagatcgacgacctc
atccacgagattcgagagcgcaccagcaacaacgaacgagtgttggtcaccaccttgacc
aagaagatggcggaggacctcactgactacctcctagagaacgggatcaaggttcgctac
ctgcactccgacatcgacacgctgcagcgcgtggaactcctgcgacagctgcggctcggt
gagttcgacgtcctcgtcggcatcaacctgctgcgcgaggggcttgacctccccgaggtg
tctttggtggccatcctcgacgctgacaaagaaggcttcctgcgctcggcgacgtcattg
atccagacgattggccgcgccgcccgcaacgtctccggcgaggtcatcatgtacgccgac
aagatcaccgactccatggcgcaggccatcgacgagacggaacggcgccgcgagaagcag
atcgcctacaacaccgagcacggcattgacccccagccgttgcggaaaaagatagccgac
atcctagaccaggtctatgaaaacaaccccgaggcaggcgctccgtcgggcggggaggcc
gcgatggtcgagcgacccgatacctccgacatgccgatggagcagctgcagaagctcatc
gacgacctcactgcccaaatgggggccgctgcccgcgacctcaagttcgagttggccggc
cgactccgcgatgagattgcggacctgaaaaaggaacagcgcggcatgaaagacattgga
atgtaa
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