Corynebacterium testudinoris: CTEST_08825
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Entry
CTEST_08825 CDS
T03956
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cted
Corynebacterium testudinoris
Pathway
cted03030
DNA replication
cted03430
Mismatch repair
cted03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CTEST_08825 (dnaE)
03430 Mismatch repair
CTEST_08825 (dnaE)
03440 Homologous recombination
CTEST_08825 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cted03032
]
CTEST_08825 (dnaE)
03400 DNA repair and recombination proteins [BR:
cted03400
]
CTEST_08825 (dnaE)
Enzymes [BR:
cted01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CTEST_08825 (dnaE)
DNA replication proteins [BR:
cted03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CTEST_08825 (dnaE)
DNA repair and recombination proteins [BR:
cted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CTEST_08825 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
AKK09195
UniProt:
A0A0G3H8Y3
LinkDB
All DBs
Position
complement(1823422..1826988)
Genome browser
AA seq
1188 aa
AA seq
DB search
MAKNSSFVHLHNHTEFSMLDGMAKVDLLAEEVGRQGMPAVGMTDHGNMFGSDAFYKRMTA
AGIKPIIGIEAYLAPESRFNKTRVRWGEPHQKSDDVSASGAYLHQTMLAENATGLKNLFY
LSSMASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFDQALEAAAMWQ
DIYGKDNYFLELMDHGLHIEQRVRTELLEIGRKLELPALVTNDCHYVLESQAQAHEAMLC
VQTGKTLNDPDRFKFDGTGYYIKPASEMRQLFDDIVPDGCDNTLLIAERVQDYGEIWESH
PHDRMPVADVPDGHTPTTWLHHEVMEGLRERFNGAEVPAEYLERAEFEINVIDMKGYPSY
FLIVAEIIKHARSIGIRVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMIRYASERWGEDKIAQVITFGTVKTKQALKDSARVQFGQPGYQMADR
ITKVLPPPIMAKDIPLSGITDSSHERFNEAGEVRQLIETDPDIRKIYETARGLEGVVRQA
GVHACAVIMASVPLLDHIPMWRRANDGALITGWDYPACEAIGLLKMDFLGLRNLTVIGDA
LDNIKSNRGEDLDLETLAIEDTETYELLGRGETLGVFQLDSGGMQELLKRMKPTGFNDIV
ASLALYRPGPMGVNAHLDYADRKNGRKPIVPIHPELEEPLRDILDETYGLIVYQEQIMEI
SRRVANYTAGEADGFRKAMGKKKPEVLEKEYAKFEAGMLSNGFSAASIKALWDTILPFAS
YAFNKSHAAGYGLVSFWTAYLKAHYAPEYMAALLTSVADKKDKSAIYLSDCRHLGLKVLP
PDVNQSENDFVAVGEDIRFGLGAIRNVGEEVVASIVETRKTKGAFTSFSDYLDKIDLLPC
NKRITESLIKGGAFDSLEHPRKGLMLVHEDAVDSVLATKKAADKGQFDLFAGFGGDDGDD
SGVSVFAIEVPDENWDRKHELALEREMLGLYVSGHPLDGFEEALEAQTDTALTTILAGEA
RHGAEVTIGGIISGVDRRFSKKDGSPWAIVTMEDHHGAQVELLVFNKVYSLVASQIVEDN
IILAKAHVSIKDDRMSLFCDDLKVPELGPGNGAGLPLRLTLRTDQCTIEHITKLKQVLVS
NKGESDVYLKIVNGDSSTMMVLGEHLRVERSGSLMGDLKATMGQGILG
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaactcctctttcgtccacttgcataaccacaccgagttttcgatgctcgac
ggaatggccaaagtggacctgctcgcagaggaggtgggccgccagggaatgcccgccgtc
ggcatgacggaccacggcaacatgttcggctcggatgcgttctacaagcgcatgaccgcc
gccgggattaagccgatcatcggcattgaggcttatctggcgccggaaagccgcttcaac
aagacccgcgtgcgctggggtgagccccaccaaaagtccgatgacgtctccgcttcgggc
gcttacctccaccagacgatgctcgcggagaacgccaccgggttgaagaacttgttctac
ctgtcatccatggcgtcgtatgaggggcagctgggcaagtggccccgcatggatgcggaa
ctcatcgcggagcacgccgatggcatcatcgccacgacgggctgcccctcgggcgatgtg
caaacccgcctccgcttgggccaatttgatcaggcattggaagccgccgcgatgtggcag
gacatctacggcaaggacaattacttcctcgaactcatggatcacggtctgcacattgag
cagcgggtgcgcaccgagctgctggaaatcgggcgcaagctcgaactccccgccctcgtc
accaacgattgccactacgttctcgaatctcaggcgcaggcccatgaggccatgctctgc
gtccagaccggcaagaccctcaacgatcctgatcgtttcaagttcgatggcaccggctac
tacatcaagcctgcctccgagatgagacagcttttcgacgacatcgttcccgacggatgc
gacaacaccctgctcatcgcggaaagggtccaagactacggggagatctgggagtcccac
ccccacgaccgcatgccggtggctgacgtgcccgacggccataccccgacgacgtggctc
caccacgaggtgatggagggcctgcgcgaacgcttcaacggtgcggaggtccccgccgag
tacctcgaacgcgccgagttcgaaatcaacgtcatcgacatgaagggctacccctcctac
ttcctcatcgtcgccgagatcatcaaacacgcccgctccatcggcatccgcgtcggcccg
ggccgtggttccgcagcaggtgcgttggtggcatacgccctgacgattactaacattgac
ccgatcgagcacggcctcctcttcgagcgcttcctcaaccccgagcgaccgtctgccccc
gatattgatatcgacttcgatgaccgtcgtcgcggcgagatgatccgctacgcctccgag
cggtggggcgaagacaagatcgcccaggtgatcaccttcggcacggtgaagacgaagcag
gcgctaaaggactccgcccgtgtgcagttcggccagcccggctaccagatggccgaccgc
atcacgaaggtccttccgccccccatcatggccaaggacattcccctgtccggcatcacc
gactcctcgcacgagcgattcaacgaagccggagaagtccgccagctcattgagacagat
ccggacatccgaaagatctacgaaactgcccgcggcctcgaaggagtggtccgccaggcc
ggcgtgcacgcttgcgccgtcatcatggcgtcggttcccctcctcgaccacattcccatg
tggcgccgcgccaacgacggggccctcatcaccggctgggactatcccgcctgcgaggcc
atcggcctactgaagatggacttcttgggtctgcgcaacctcaccgtcatcggagatgcg
ctggacaacatcaagtccaaccgcggcgaagacctcgacctagagacgctggcgatcgag
gatacggagacctacgaactgctcggccgcggcgagaccctcggcgtgttccagctggac
tccggcggcatgcaggagctgctcaagcgaatgaagcccaccggcttcaatgacatcgtc
gcctccctggcgctgtaccggcccggcccgatgggtgtgaacgcccacctggactacgcc
gaccgcaagaacggccgcaaacccatcgtgcccatccatcccgagctggaggagccgctg
cgcgacatcctcgacgaaacctacggcctcatcgtctaccaagagcagatcatggagatc
tcgcgccgggtagccaactatacggccggtgaagcagatggattccgcaaggccatgggc
aagaagaagcccgaggtgctggagaaggaatacgccaagttcgaggccgggatgctttcc
aacggcttcagcgcggcatccatcaaggcactgtgggacacgatcctcccgttcgcctcc
tacgcgtttaacaagtcccacgccgccggatatgggctggtgtccttctggaccgcctac
ctcaaggcccactacgcccccgaatacatggccgccctgttgacctccgtcgcggataag
aaggacaagtccgccatctacctctccgactgccggcaccttggtttgaaggtcctcccg
ccggacgttaaccagtccgaaaacgacttcgtggccgtcggcgaggacattcgcttcggc
ctgggggcaatccgcaacgtcggtgaggaggtggtggcatccatcgtggaaacccgcaag
acgaagggcgcgttcaccagtttctccgattacctcgacaaaattgacctgcttccctgc
aataagcgcatcacggaatcgctcatcaagggtggagccttcgactccttggagcacccg
cgcaaggggctcatgctggtccacgaggacgccgtcgattctgtcctggcgacgaagaaa
gccgccgataagggccaattcgatctctttgccggcttcggcggcgatgacggggatgat
agcggcgtcagcgtgttcgccatcgaggttcccgatgagaactgggaccgtaagcacgag
ctggcgctcgaacgcgagatgcttggtctctacgtctcgggtcatcccctcgacggcttt
gaggaggcgctcgaggcccaaaccgacaccgctttgacgacgatcctcgccggagaggcc
cggcacggggccgaggtcaccatcggcggcatcatctcgggtgtggaccgccgcttctcc
aaaaaggacggctccccctgggccatcgtgactatggaagatcaccacggcgcccaggtg
gaactcctcgtcttcaacaaggtctactcgctcgtggcgtcccagatcgtcgaagacaac
atcatcctggctaaggctcacgtgtccatcaaagatgatcggatgtctttgttctgtgat
gacctcaaagtccccgagctggggccgggcaatggtgccgggctacccctgcgcctgacg
ctgcgcaccgatcagtgcaccatcgaacacatcaccaaactcaagcaggtgttggtctct
aacaagggcgaatccgatgtgtacctcaagatcgtcaacggcgattcctccacgatgatg
gtcctcggcgagcacttgcgcgtggagcgctccggatcgttgatgggagacctcaaggcc
acgatggggcaggggatcttgggctag
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integrated database retrieval system
