Corynebacterium testudinoris: CTEST_09700
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Entry
CTEST_09700 CDS
T03956
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cted
Corynebacterium testudinoris
Brite
KEGG Orthology (KO) [BR:
cted00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cted03016
]
CTEST_09700
Enzymes [BR:
cted01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CTEST_09700
Transfer RNA biogenesis [BR:
cted03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CTEST_09700
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Ortholog
Paralog
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GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
acVLRF1
Motif
Other DBs
NCBI-ProteinID:
AKK09365
UniProt:
A0A0G3H9D2
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All DBs
Position
complement(2007980..2008579)
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AA seq
199 aa
AA seq
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MFPKRVLRGTFAPHLTATITMKRLFSALLPSEAAREHLVSALRPLRAEFPHNLRWVDPDN
WHITVSFYGEHPNDTSQLTRHLAQAAAACAPLNLRLKGAGSFGHRTMWMGIGGDGRALKN
LMADSDVEPSSQAEMKPHLTIARTKERWAVAELVHILSVYEGPAFTCDELVLIESQLGRG
RGGGPRYEVVERITLGWGT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaaaacgagtgcttcgtggcacattcgcccctcacctcactgcaaccatcacc
atgaaaagactgttttccgccctgctgccctctgaagcagccagggaacatctggtgtcc
gccctcagacccctccgagccgagtttccccacaacctgcgctgggtagaccccgacaac
tggcacatcaccgtgagcttctatggtgagcaccccaacgacacctcccagctcaccagg
catctggcacaggcggccgcggcatgtgctcccttgaatctcaggctcaaaggcgccgga
tcgtttgggcatcgcaccatgtggatgggcatcggcggagacgggcgggctctgaaaaat
cttatggctgacagtgacgtggagccgagcagtcaggcagagatgaaaccgcacctgacc
atcgcgcgcacgaaagagcggtgggcggtggccgaattggtgcacatcctcagcgtctac
gaaggccccgcgtttacgtgcgacgagctggtgctcatagagtcgcagctgggtcgcggg
cgaggtgggggaccgcgctacgaggtggtggagcggatcacgctggggtggggtacatag
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