Corynebacterium testudinoris: CTEST_12805
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Entry
CTEST_12805 CDS
T03956
Symbol
nei1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cted
Corynebacterium testudinoris
Pathway
cted03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cted00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CTEST_12805 (nei1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cted03400
]
CTEST_12805 (nei1)
Enzymes [BR:
cted01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CTEST_12805 (nei1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CTEST_12805 (nei1)
DNA repair and recombination proteins [BR:
cted03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CTEST_12805 (nei1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AKK09964
UniProt:
A0A0G3H9I0
LinkDB
All DBs
Position
2650578..2651432
Genome browser
AA seq
284 aa
AA seq
DB search
MTLPTLPRPHYTVRMPEGHVIHRLANELNERFAGRDLHITSPQGRFAAEASLIDGAPITH
AEARGKHLFIDVDAPHPEHILYIHLGLIGEMRFEPTDDVWGQIRLRIDNGEEAANLRGPQ
WCRLITDAEYDIAVAKLGEDPLREDASPDHLWPRVSRSGRSIGSLLMDQKLFAGVGNIYR
AETLFRLGISPFLPGNQLERNEFDSIWFDLVGLMNDGVRAGRIDTVRPEHTPEAMNREPR
KDDHGGEVYVYRRSGQPCFVCGTDIAEKVMEGRNLFWCPGCQPD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcccgactctaccgcgtccgcattacactgtgcgcatgcccgaaggtcacgtc
atccaccgcctcgccaatgagctcaacgaacgcttcgcgggccgcgacctgcacatcacc
tccccccaggggaggttcgccgctgaggcatcgcttatcgacggcgcgcccatcacccat
gcggaagcacgaggcaagcacttattcatcgacgtcgacgcgcctcaccccgagcacatc
ctctacatccacttagggctcatcggggaaatgcgtttcgagcccaccgacgacgtgtgg
ggccagattcgcctgcggatcgacaacggcgaggaggccgccaacctgcgcggaccccaa
tggtgccggttgatcacggacgccgaatacgacatcgccgtggccaagctcggcgaagat
cccctgcgcgaagatgcctcccccgaccacctctggccccgcgtctcccgctccggccgc
agcatcggctccctgctcatggaccaaaaactcttcgccggcgtgggcaacatctaccgc
gcggaaacgctcttccgcctcggcatctcccccttcctccccggcaaccagctcgaacgc
aacgagttcgacagcatctggttcgacctcgtgggcctcatgaacgacggagttcgggcc
ggacgcattgataccgtccgacccgaacacaccccggaagccatgaaccgcgagccccgc
aaggacgaccacggcggcgaagtctacgtctaccgccgctccggccaaccctgcttcgtc
tgcggcaccgatattgcagagaaggtcatggagggccggaacctcttctggtgtcccggc
tgccaacccgactag
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