Cryptococcus tetragattii: 91987406
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Entry
91987406 CDS
T10981
Symbol
I308_100548
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03020
RNA polymerase
cteg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
91987406 (I308_100548)
09124 Replication and repair
03420 Nucleotide excision repair
91987406 (I308_100548)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cteg03021
]
91987406 (I308_100548)
03400 DNA repair and recombination proteins [BR:
cteg03400
]
91987406 (I308_100548)
Enzymes [BR:
cteg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
91987406 (I308_100548)
Transcription machinery [BR:
cteg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
91987406 (I308_100548)
DNA repair and recombination proteins [BR:
cteg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
91987406 (I308_100548)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
91987406
NCBI-ProteinID:
XP_066617018
LinkDB
All DBs
Position
1:complement(1396575..1400627)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDADDYPLASQPLDDGFTYDPDYDYTQQTAPKNDEDEEKYDVDDDEPISQEDYWTVINSF
FEEKGLVRQQLESFNEFIENTMQEIVDDHSRLTLDQFTQYTGVAGDETRRYEISFGQIYL
ARVNHTEMDGRTNMLFPQEARLRNLTYSAPLYVDIKKRTLTASGVDDPVEADWQPAVGDD
GEVESAEEEKTSIGKVPVMVRSNFCLLHGLPDDQCHEIGECPYDQGGYFIISGSEKVLIA
QERMATNHVFVFLKAAPARFTYFAEINSQKEKGGRVANHTEVRMYARASGTTGGVIRVSL
PYTKVDIPLVVVFRALGIVPDRDVLSHVCFGAEDEALLEMLQPSIEESFAVQDRDTALDF
IGRRGQHEKAPRAQRQRAAFDILHKEFLPHVSTAEGFESKKAYFLGYMVHRLCMAALGRK
ELDDRDHFGNKRLDLAGPLMAEMFNVVFGKLREDMYRYLKKCVEQNKEFALNMAIRPNTV
TDGLKYALATGNWGKRDNTRAGVSQVLNRYTFASTLSHLRRTNTPIGRDSKAAKPRQLHN
THWGMVCPAETPEGSACGLVKNLALMSYISVGSYSAPVMEFLEEWGLEDLSEYQDAPTAT
KVFVNGVWMGIHRDAPTLHNNLLQMRRGGQLKYEVSIVRDIRERELRLYTDAGRVCRPLF
IVDQPTQTLRLKRDHIDRIDQMADEGLLSGAWDKLLSEGIVEYVDAAEEETILIAMTPED
LVNARTAHSKQELVRDRAAHNLESFDPAARIKSTVWSQQYTHMEIHPSMILGVCASIVPF
PDHNQSPRNTYQSAMGKQAMGVCLTNYQLRMDTMVNVLYYPQKPLATTRSMEYLKFSELP
AGQNAIVAIMCYSGYNQEDSVIMNQSSIDRGLFRSLYFRSYTDTEKMKGMVKAETIEKPD
RNETLRMKHGTSDRYAKLDVDGLVAPGTNVNGDDILIGKTAPLPEDSEELGQRTQLHTKR
DISTPLKSTEQGVVDQVMLSTNGEGNMFVKIRVRSTRVPQIGDKFASRHGQKGTIGITYR
QEDMPFTAEGLVPDIIINPHAIPSRMTIGHLVECLLSKVSTLTGAEGDATPFTELTVEAV
SKVLRAKGYQSRGFEVLYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIHARARGPLQILT
RQPVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCDICGLMAVANLK
KQEFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRMYGETD
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagacgactatccgcttgcatcccagcccctcgatgatggcttcacttacgat
ccggattacgattacactcaacagacggctccaaagaatgacgaggatgaagagaagtac
gacgttgacgacgatgagcccattagtcaggaggattactggactgttatcaattcgttc
tttgaggaaaagggtcttgttcgtcagcagctcgaatctttcaacgagttcatcgaaaac
accatgcaagagatagtggatgatcattcgaggttaactttggaccaattcacacaatat
accggcgttgcaggtgacgaaacaagacgatacgaaatttcctttggtcaaatctacttg
gctcgggtcaatcatacggaaatggatggtagaactaatatgctgttcccgcaagaagca
cgtctcaggaacttaacttactcggcgcctctgtatgttgacatcaaaaagaggaccttg
acagcatccggggttgatgaccctgtggaagctgattggcagcctgccgtgggcgacgat
ggtgaggtggaaagtgctgaggaagaaaagacatcaatcggcaaagtacctgtcatggtt
cgctccaacttctgtctcctgcatggcctgcctgacgaccagtgtcatgagattggagaa
tgcccttacgaccaaggcggttattttattatctctggttccgagaaggtcttgattgct
caggagagaatggccacaaaccatgttttcgtgttcctaaaagcggctcctgcgagattc
acatattttgcggaaatcaactctcagaaagaaaagggtgggcgggtggcgaatcataca
gaagtcagaatgtacgcaagggcatccggaacaactggtggcgtcattcgcgtatctctt
ccgtataccaaagtcgacatccccctcgttgtggtctttcgagcgttgggtattgtgccc
gatagagacgttctcagccatgtctgctttggcgccgaagatgaagcgcttcttgaaatg
cttcaacccagcattgaagaatcttttgctgtacaagaccgtgacactgctctcgacttt
atcggtcgtcgtggtcaacatgaaaaggcccctcgagcccagcggcagcgtgcagccttt
gatatccttcacaaagagtttttgccgcacgtgtctaccgccgaaggatttgagtccaag
aaggcgtacttcctgggctacatggtgcataggctatgtatggcggcactaggaagaaag
gagttggatgacagagatcattttgggaataaaaggttggaccttgcagggccattgatg
gcggagatgttcaatgtagtgtttgggaaattgagagaagacatgtacagatatctgaaa
aagtgtgtcgagcaaaataaggagtttgcccttaacatggctattcgccctaacacagtt
accgacggtctcaaatacgctcttgctacaggcaattggggcaagcgggacaatactcga
gcaggtgtatcgcaagttctcaatagatatacttttgcttctaccctctcccatttgcgg
cgtactaacacgcccatcgggcgtgactcaaaggccgctaaaccacgtcaacttcacaac
acccattggggcatggtttgtcctgccgagacgcctgaaggctccgcgtgtggtcttgtc
aagaatctcgcactcatgtcttacatttcagtggggtcttattcggctccagtcatggaa
tttttggaagaatggggtctggaagatctttcagaatatcaagatgcgcccactgcgacg
aaagtatttgtcaatggtgtctggatgggtatccatcgagacgcacccaccttgcacaac
aacctcttgcaaatgcgccgtggtggtcagctcaaatacgaagtcagtatcgttcgagat
atcagagagagagagctacgcttgtacaccgatgcgggacgtgtctgtagaccgcttttc
attgtcgaccagccaacgcagacattgcggctcaaacgtgaccacattgacaggattgac
cagatggcagacgagggtcttttgtcaggagcgtgggacaagctattatccgagggtatt
gtcgagtatgtggacgcagcggaggaggagaccatattaatagccatgacgcctgaagat
cttgtgaacgctcgcactgcacacagcaagcaagagcttgtaagggacagggcagcccac
aatcttgaatcctttgatcctgcggctcgtatcaagagtacggtgtggagccagcagtat
acccacatggagattcatccgagtatgattcttggcgtctgtgctagtatcgttcctttc
cccgaccataaccaatctcctcgaaatacctatcagtctgcgatgggcaaacaagccatg
ggcgtctgcctcaccaattatcagcttcgtatggatactatggtcaatgtgctgtactat
cctcaaaaaccacttgccactactcgttcaatggagtatctcaaattctctgagcttcct
gctggtcaaaacgcaattgttgccatcatgtgttattctggttacaatcaagaagattcc
gtaattatgaaccagtcatcaatcgaccgcggtcttttccgatcgttgtacttccgttcc
tacactgatacggagaagatgaagggtatggtcaaggcagagacaattgagaaaccagac
aggaatgagacattacgaatgaagcatggaaccagcgatcggtacgctaaacttgacgtc
gatggccttgttgctccgggaacaaacgtcaacggtgatgatattctcattggcaagact
gcacctttgcctgaagacagcgaagagcttggtcaaaggactcaacttcacacaaagcga
gatatatctacaccgctgaaaagcaccgagcagggcgttgttgaccaggtcatgctgagt
accaacggagaaggtaacatgtttgtcaaaattcgtgtgagatctacaagagtgccgcaa
ataggtgacaagtttgcttcccgacacggtcagaaaggtactatcggtatcacctatcgc
caagaagacatgccgtttacagcggagggtcttgttcccgatatcatcatcaatccgcat
gctattccttctcgaatgactattggccatttggttgaatgtcttttatcaaaagtgtca
actttaactggagctgaaggagacgctactcccttcacggagctgactgtcgaagctgtt
tccaaagttctgcgagcaaaagggtaccagtctcgtggttttgaagttctttatcatggt
catacggggagaaaactccaggcccaggtttactttggacctacctactatcaaagacta
aagcatatggtggatgataagatccacgctcgagcacgtggacccttgcaaattttaacg
agacagccagtagaaggtagaagtagagacggtggtctgcgatttggtgaaatggagaga
gactgcatgatttcgcatggtatcgctggatttttgaaggaaaggatgtacgattcttcc
gatgcgttcagaatacatgtgtgcgacatctgtggtctcatggctgttgccaatctcaaa
aaacaagagttctactgctctgtctgcaggaacagtacgcagatctcccaggtgtacatc
ccgtatgctgccaaattgctgttccaagagttacaagccatgaacattgcatgtcgaatg
tatggagagacagattga
DBGET
integrated database retrieval system
