Cryptococcus tetragattii: 91988566
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Entry
91988566 CDS
T10981
Symbol
I308_101708
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91988566 (I308_101708)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cteg03021
]
91988566 (I308_101708)
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91988566 (I308_101708)
Transcription machinery [BR:
cteg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91988566 (I308_101708)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
91988566 (I308_101708)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Torus
zf-CCCH
zf-CCCH_4
zf-CCCH_2
zf_CCCH_4
zf-CCCH_3
zf-CCCH_9
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
91988566
NCBI-ProteinID:
XP_066615039
LinkDB
All DBs
Position
3:complement(<176136..>178321)
Genome browser
AA seq
674 aa
AA seq
DB search
MSVPLPSPSPLPSAQDGPISSTDDSSNMSASAKPIPRSRPAPVATPSSPEKTSGTPASYK
YRPGAATSIGKSFNNDNWRDRSPAPTSAMPTTFSGKGPERTVGFEKRDVSSLKSNGGSAL
SREREKEENKEKESEKDKEGKEKSALSHVPCRFFKAGACTAGESCPFSHAAPDSAKREVC
QWFLKGNCKFGHKCALAHVRPGEPMSMDRKNKKAAQLEARERSGEVTTSGTRKATPTAIP
SALEESGASPVPIRSALSSSIQSNPTRMGSSPMREPFGPPSGALPNSPPNGFAHSYTRGH
PAFASSPNRPSPLSASFGAVGSGLAAGSVPGPFSLKQGSNLLSSLRPPVSATPTFSSSFS
HSSLAIERPSNAVATPLSASFAGEAPALHRSIWARSDQPAEPLSPRRPIPRTIKPEAVFE
DDDDHGEEFLPSSLSDLLTPQERARRMSHRDSQDSSYSPSLAGYAAQAPIWGGERLAQSA
GPTMGQKGFLQSLWSADGEDVRKFQSTQPSSAQPQKQDFAFGPATTQASGPRTSLLTQQR
SPDSPSPTSPVRLSSFSPSAVGPGEPFLIRNLGDPGSPSARALIEHAPGQSLPGGLANAL
SRLHLHGPRSTSSLAAVNSGNGRGIGGLGAEWRLAEHEAEGSEDGDGGLTPPNGLGTLHS
KREEHDEGLFAMDG
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttccgctcccttccccttctcctctcccatctgctcaggatggccctataagt
agcacggacgacagttccaacatgtctgcttctgcaaagcctatcccccgctcacggccc
gctcctgtcgccacccccagctcgcctgaaaagaccagcggtactcctgcttcatacaag
tatcgacctggcgcagcgacttctattggcaaatccttcaacaacgacaactggcgcgat
cgatcgcccgcacctacttctgccatgcccactactttcagtgggaagggccctgagagg
acagtgggatttgaaaagagggacgttagctctttgaagagcaacggaggtagcgcgctg
agtagagagagagaaaaagaggagaacaaggaaaaggaaagtgagaaggacaaggagggc
aaggagaaatctgccttgagccacgttccatgtcgatttttcaaggccggcgcttgtact
gctggagaaagttgtccattctctcacgctgctccggattccgcaaagcgagaggtatgc
cagtggttcctgaagggcaactgcaagtttggacacaagtgtgctcttgcccacgttcga
cctggcgagccgatgtcaatggatcgaaaaaacaagaaagcagcgcagctcgaggcgcga
gaacgaagtggtgaggtaactaccagcgggaccaggaaagccactcccactgctatcccc
agcgctcttgaagagtctggtgccagccctgtccctatccgatctgctctttcctcctca
atccaatcgaatcctactcgtatgggatcttctcccatgcgagagccttttggtcctccc
tctggggcgttgccgaacagtcctcctaatggctttgcgcactcttacactcgaggtcat
ccagcatttgcttcttcgcccaaccggccttctcctctttctgcaagttttggtgctgta
ggcagtggactagctgccgggagcgttcctggacctttctcccttaagcagggttcaaac
ctcctttcctctcttcgaccaccggtctctgctactcccacattctcctcttccttctct
cattcatcactggctattgagcgtccctccaacgctgttgctacacctctttccgcgtct
tttgctggagaagctcctgcgttgcaccgctccatttgggctcgttccgatcaacctgct
gaacctctgtctcctcgtcgaccgatcccgcgaacaatcaagcccgaagccgtgtttgaa
gatgatgatgaccacggagaagagttccttccttcttctctgtcagacctactcaccccg
caagaacgggcccgccgtatgtctcaccgagacagtcaagactcttcatactctccttcc
ctcgctggatacgctgctcaagctcccatatggggaggcgagcgtcttgcacagagtgca
ggccctaccatgggacaaaagggattcttgcagtccctctggtctgcagatggtgaagat
gtccgcaaattccaatctacccaaccctccagtgcccagccgcaaaagcaagactttgcc
tttggtcccgctaccacccaagcttctggtcctcgcacttcgttgctcacccaacaacga
tctcccgattccccctccccaactagtcctgtccgattatcttccttcagcccctccgcg
gttggtcctggcgagccattcttgatccgtaacctcggcgatccgggatccccttccgcc
cgcgcactgatcgaacatgctcccggccagtccttacctggcggtctggctaatgccttg
tcgaggctccacctccacggaccccgatcgacgagctcgttggcggcggtcaattccggg
aacgggagggggattgggggactcggtgcagagtggaggttggctgagcatgaggcggaa
ggaagtgaagatggtgacggagggctaaccccgcctaatggcctggggacattgcattcc
aagagggaagaacatgatgaggggctgtttgcgatggacggataa
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integrated database retrieval system
