Cryptococcus tetragattii: 91988852
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Entry
91988852 CDS
T10981
Symbol
I308_101994
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03022
Basal transcription factors
cteg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
91988852 (I308_101994)
09124 Replication and repair
03420 Nucleotide excision repair
91988852 (I308_101994)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cteg03021
]
91988852 (I308_101994)
03400 DNA repair and recombination proteins [BR:
cteg03400
]
91988852 (I308_101994)
Transcription machinery [BR:
cteg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
91988852 (I308_101994)
DNA repair and recombination proteins [BR:
cteg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
91988852 (I308_101994)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GlfT2_domain3
Motif
Other DBs
NCBI-GeneID:
91988852
NCBI-ProteinID:
XP_066615322
LinkDB
All DBs
Position
3:complement(950027..954166)
Genome browser
AA seq
811 aa
AA seq
DB search
MVGRWADLACTNEHGSISVQQVFEVFGSFELMIPCFQEILEDIAHISNNQFGHFAITKLV
SYPNFYKQTCEAIINSYPPVATTHHGVNLAKIALTEGGRASFVKYVEAICRQDDGRTPGI
VTIATSSIGKAHLTFVMSCLTPSEHVRVRSTCRTYSTTLRNCQSGNDLLRALGIMHSTST
KHRNAGISNANPRQYRIWVPKVKDAMDRQSQAMNRAINMLASKPGKERVSLKILFKENVP
PGGLLFVFTNASSREDDRKAVQDILIPFVAVNKNPTASTPDTPGSATTPNTPSAATVAAM
SDVAKGKRKMNEMTPMGLSAASAESSPLPPAVRSQRRKYNTLRQRVLEKNDALRMLHRDL
VLGRQITEEEFWEGREALIQAEEMAYAQKPGRPSRLLDDRFDLDAGRRGKTTGGTGVGIK
QADNGPVILKLSKELTREIFEEFPVVQDAYARYVPGISETEFWSRYFTSQLWERHRASVR
KSANDEISRKKDDIFDQYLEEPDWNLQPRQPMPDRDGVERYLDLAATEEDHGEASSIRDV
TMQAGRERSALPLIRRFNDHSKKLLRAASAGQTIRNSAYGGDIDIYEEINLEDLHDPSTT
PAIILDVENAAALDEGDDKLAPTGILLGHSDSELLAMATESASILRDSAPDFSSVCLANP
GPFIDDDESRRNPAYEAFAKQRDGQAAALAAVRDMWSRANAENAVLPAFPEMLFEQIRSC
HNSATEFLRQYWSAILPSVPGALGGQTPGAKDAKAAKMASYLKNTSTKIEAIVQTAQITG
FDPERVRKVLAPTLGAVEVALERERKRVKGK
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggtcggacgctgggctgatctggcctgtaccaatgagcacggatcgatatcggtacaa
caggtttttgaagtttttggatcctttgaattaatgattccctgctttcaagagattttg
gaagatatagcgcatatttccaacaaccaatttggccacttcgcgatcacaaaattagtt
agctatcccaatttctataaacagacgtgcgaggcaatcataaactcgtacccaccagtt
gctaccacccatcatggagtgaaccttgccaagatcgccttgaccgaaggaggccgggca
agcttcgttaagtatgtggaggctatttgtcgacaggatgacgggcgcacacctggaatc
gttacgatcgccacatcttccattggtaaagcccatctaacctttgtcatgtcatgtctc
acgccttcggaacatgtgcgggtacgttcgacttgccgtacatatagcaccactctccga
aactgccagagcggtaatgacctccttcgagcactcggcatcatgcattccacttcaaca
aagcaccgtaatgctggcatcagtaatgcgaatcctcggcaatacagaatatgggttcca
aaggtcaaggatgctatggatcgtcaaagtcaggccatgaatagggccatcaatatgtta
gcaagtaaacctggaaaagagcgcgtcagtctcaagatactcttcaaagaaaatgtgccc
ccaggaggtcttcttttcgttttcaccaatgccagcagtagagaagatgacagaaaagct
gtgcaagacattcttataccatttgtcgccgtaaataagaatcccactgcatcaaccccc
gatactccgggatctgccacgaccccgaacactcctagtgcagcaacggttgcagctatg
tcggatgtcgcgaaaggaaagcgaaagatgaatgagatgacccccatgggcctttccgcc
gcgtcagctgaatcgtctcctttacctcctgcagtaaggtcacagaggagaaagtacaac
acgttgaggcagagggtactggaaaagaatgacgctttacggatgttacatcgtgatcta
gtgttgggaaggcaaatcactgaagaggagttctgggagggtagggaggcgctcattcaa
gcagaggaaatggcgtatgcgcagaagcctggtagaccttctagactgttagacgaccgg
tttgatctcgatgcaggaaggagaggcaagactactggaggaacgggtgtcggtatcaaa
caagccgataacgggccggtcatattaaagctctcaaaagaattaacaagagagatattt
gaagaatttcccgttgttcaggacgcttatgcgagatatgtccccgggattagcgaaacc
gagttctggtctaggtatttcacatcacagctatgggaacgacatcgtgccagtgtgcga
aaatctgccaatgatgagatttcaaggaaaaaggatgacatctttgaccagtatctggaa
gagccggattggaatctgcagccgaggcaacccatgccggatagagatggcgtggaacga
tatcttgatttagcagcaacagaggaggatcatggagaggcttcttctatccgggacgtc
acaatgcaagcagggcgggaacgaagtgctcttcctctaatcagacgattcaatgatcat
tctaaaaaattgcttcgcgctgcgagtgctgggcagactattcgaaatagcgcttatggc
ggggacattgatatatacgaagaaatcaatctcgaagatcttcatgacccttcaacgact
ccagctatcattctagacgttgaaaatgctgccgccttggatgaaggggacgacaaatta
gctcctacgggcattctccttggacactctgactcagagctcttggctatggccactgag
tccgcttctattttacgcgacagcgcgcctgatttctccagcgtctgcttggccaatccc
ggtccgtttatcgacgatgacgaaagtcggagaaatccagcatatgaggcattcgctaaa
cagagggatggtcaggctgctgcattggccgccgtgagagatatgtggtcgcgggccaat
gcggaaaatgctgtgctgcctgccttcccagagatgcttttcgaacaaattcggtcttgc
cataattcggcaaccgagtttttgcgacaatactggtcagccattctaccctctgtccca
ggagcgctcggtgggcaaaccccaggtgctaaagatgccaaggctgccaagatggctagt
tatctgaagaatacttcaaccaaaattgaggcaattgtacaaaccgcgcagatcactggt
ttcgatccagagagggtcaggaaggtgcttgcccctactcttggtgcagttgaggtggct
cttgaaagagagaggaaaagagtaaaaggcaaatag
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