Cryptococcus tetragattii: 91989850
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Entry
91989850 CDS
T10981
Symbol
I308_102994
Name
(RefSeq) uncharacterized protein
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03018
RNA degradation
cteg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91989850 (I308_102994)
09123 Folding, sorting and degradation
03018 RNA degradation
91989850 (I308_102994)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91989850 (I308_102994)
03041 Spliceosome [BR:
cteg03041
]
91989850 (I308_102994)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91989850 (I308_102994)
mRNA degradation factors
5'-3' decay
Lsm complex
91989850 (I308_102994)
Spliceosome [BR:
cteg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
91989850 (I308_102994)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
91989850
NCBI-ProteinID:
XP_066614965
LinkDB
All DBs
Position
4
Genome browser
AA seq
84 aa
AA seq
DB search
MASTILPLELVDRCIGSPIWVLMKNEREFTGTLMGFDDYVNMVLKDVKEYEVTASGTTET
DLGDTLLNGNNIAMLIPGGKGPKA
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggctagcacgatcctcccccttgaacttgtcgacagatgtatcggctcccctatttgg
gtcttgatgaagaatgaacgagagtttactggaactttgatgggtttcgacgactatgtc
aacatggttttgaaagatgttaaggagtacgaagttactgcttcaggaaccacagagact
gaccttggggatactttattaaacgggaacaacatcgccatgcttataccaggtggcaag
gggcccaaggcttag
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