Cryptococcus tetragattii: 91990249
Help
Entry
91990249 CDS
T10981
Symbol
I308_103393
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91990249 (I308_103393)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91990249 (I308_103393)
03041 Spliceosome [BR:
cteg03041
]
91990249 (I308_103393)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
91990249 (I308_103393)
Spliceosome [BR:
cteg03041
]
Complex B
Other components
Prp19-related factors
91990249 (I308_103393)
Complex C
91990249 (I308_103393)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_19
TPR_2
TPR_12
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
91990249
NCBI-ProteinID:
XP_066614275
LinkDB
All DBs
Position
5:993349..996648
Genome browser
AA seq
1031 aa
AA seq
DB search
MASTSLVDTVTSYFPLTLPIPTPITHPHLIPSADLPVEEDLLHNPENLRSWLSYIHNVKE
KIAADEPAKSGLISPEEEILGPLASKNARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTR
QSYVLGELTNDAKEARSQQGKRGTAYKTNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLI
ATGERMIMCLPNLPVPWLLHLGVLLHPKCPSVFKNGSYARRTFDRALRTLPPSLHGRVWG
LYLRWAEVIGGDAGERVWRRYLKVDPSLTERHITYLLEADEPRPLAAAKYLLSIARRAQQ
NLYSSLEGKSPYQLFVDFLELVEKYADQIGMDEEQTIELQKTKRAVEEKIDGELPPVEEQ
EQQSQEEPASINGRLMRIAGPPVPLEQEKLFKPTNAGSAQAPTQLTYDEDTDPSNLRLLD
VEGIVERDGLQVYKDQAGRLWTGLATYWIKKGEFERASATFEKGLAAVVTIRDFTQIFDA
YAEFSETMISTLMDALADEDNLEDEDFDAEETEQELDERMKSFEELMDRRPFLVNDVLLR
RNPNEVVEWEKRIALHGDDDAKVVETYVKALDIINPRKATGPLYPLYVNFAKFYEEGGSK
DDNGEPKNEPDLKQARKIFERAVKVPFKAVDELAEVWCEWAEMELRDENYEEAIRLMQRA
TTVPKNTKINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANA
QVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARD
LFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIAK
ATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCDPR
IEPEFWQEWNDFEIDTGSEDTFREMLRIKRAVQASFNTETSFIAAQAAAASKGTEKPTDA
SAQEAHEAADPMAAMERELNTVGADGARKGGAPAFVASTLNKTNANGIDEGGNEAGEVAN
PDAIVMDEDEF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacatccctcgtggacaccgttacgtcctacttcccactcacgctccccatc
cccacccccatcacccatccacatctcatcccctccgcggacctccctgtcgaagaagac
ctcctgcacaacccggaaaacctccgttcatggctttcctacatccacaacgtcaaagaa
aagattgctgccgatgagcctgccaagagtggcttgatttccccggaggaagagattctc
gggccattggcgagcaagaatgcgcgagacggattgcaacgattggtatcaatctacgag
cgtgccatcgccgttttcccgaccagctacaagctctggaaagcgtattaccttacccgc
caatcttacgtgctaggggaactcacgaacgatgccaaagaagcgcgatctcagcagggc
aagcggggtaccgcgtacaagaccaacgttcgagagctcttagacggtgccgaagaagcc
cacgagtggacaggtggtcttgatcccgtggtcggttacgccgaatggagaagcttgatt
gcgaccggtgaaaggatgatcatgtgtcttcccaacttgccagttccatggcttcttcat
ctgggcgtcttgttgcatcctaaatgtccttctgttttcaagaacggctcgtacgcaaga
aggacgtttgatagggcgttgaggacattgcctcccagtctgcacggaagagtctggggc
ctctatctccgctgggccgaggttattggcggagacgctggtgagagagtctggagaagg
tacctcaaggtcgatccgagcttaacagaacgacacatcacctatctcctcgaagctgat
gagcctcgccctctcgctgctgccaaataccttctttccattgctcgtcgtgctcaacaa
aatctctactcttctctggaaggcaaatctccttatcaactgtttgttgactttttggag
ctcgtggaaaagtatgccgatcagatcggtatggatgaagaacagacgatcgagttgcaa
aagacaaaacgtgcagtggaggaaaagattgacggggagctgccaccggttgaagaacag
gagcagcagtctcaggaagagcccgctagcatcaacggccgtctgatgcgcattgcaggg
ccccctgtcccacttgagcaagaaaaactcttcaaacctaccaatgccggatcagcccaa
gctcccactcaattgacctacgatgaagataccgatccatcaaaccttcggctacttgat
gtggaaggtatcgtcgagagagatggtctccaggtctataaggaccaagctggtcgattg
tggactggtttggctacctattggatcaagaaaggagagtttgaaagggcctctgcgaca
tttgagaagggtcttgcagctgtggtgactattcgagacttcactcagattttcgacgcc
tatgccgaattttcggagaccatgatctccaccctcatggacgctcttgctgacgaggat
aaccttgaagatgaagactttgatgcagaagagaccgaacaagagttggatgagcgaatg
aagagtttcgaggagttaatggaccgccgaccattccttgttaacgatgtgctcctccgt
cgaaacccgaacgaagttgtcgagtgggaaaaacgtatcgcccttcatggtgatgatgac
gccaaagtcgttgaaacatacgtcaaggcactcgatattatcaacccccgaaaagccacc
ggacctctgtaccccttgtatgtcaactttgccaagttctatgaagaaggagggagcaag
gacgacaatggagagccaaagaatgagcctgatttgaagcaagcgaggaagatctttgag
cgggcggtcaaagtgcctttcaaggcggttgatgaattagcagaggtttggtgcgagtgg
gctgagatggagttgagagatgagaactacgaggaggcgattcgattgatgcagcgggcg
acaactgtccccaaaaacacgaaaatcaactattacgacgataacatccctccccaatct
cgacttttcaagtccctcaaactgtggtcctactattctgaccttgaagagtctattggg
accgtcgaatcaaccaaggcagtgtacgacaagatcatggagctgaaaatcgccaacgcc
caagtcattgtcaattatgccacgttcttggaagagaacaagtactttgaggaaagtttc
aaggtgtacgaacggggaatcgaattgttccacttccccatcgctttcgagatctggaat
atttacctctctaagtttgttaagcgttacggcggcaagaaactcgaacgtgcacgagac
ctgtttgaacaagccctcgaaaactgccctgaaaagttctgcaagcctctctacctcatg
tacgccaagctggaggaagagcacggtcttgccaagcgcgcaatgggtatctacgaccgt
gctgcatcaaccgttcaagattccgacaagttcgagatgtacaccatctacatcgccaaa
gctactgctaactttggtcttcctgccacacgaccaatttacgagcgggccctcgagtct
ttgcccgacaagcagactgcggaaatgtgtcgacgattcgcgagaatggagaggaagttg
ggtgagattgatagagcaagggcgatctatgcgcatgcgagccaattctgtgatcccaga
attgagcccgaattctggcaagaatggaatgacttcgagatcgacactggatctgaagat
acattccgagaaatgctccgtatcaaacgagccgtccaagcgtctttcaacactgagaca
tcgttcattgctgcccaggctgctgccgcgtccaaaggtactgaaaagcctactgatgct
tcagctcaggaagcccacgaggctgccgatcctatggctgcgatggagcgtgaattgaac
accgttggagctgatggcgcaaggaagggcggagcaccggcttttgtcgcgagtacatta
aacaagaccaatgccaacggaattgatgaaggggggaacgaagcaggcgaagttgcgaac
cctgatgcgatcgttatggatgaggatgagttctaa
DBGET
integrated database retrieval system
