Cryptococcus tetragattii: 91990682
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Entry
91990682 CDS
T10981
Symbol
I308_103826
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03008
Ribosome biogenesis in eukaryotes
cteg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
91990682 (I308_103826)
09123 Folding, sorting and degradation
03018 RNA degradation
91990682 (I308_103826)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cteg03021
]
91990682 (I308_103826)
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91990682 (I308_103826)
03009 Ribosome biogenesis [BR:
cteg03009
]
91990682 (I308_103826)
03016 Transfer RNA biogenesis [BR:
cteg03016
]
91990682 (I308_103826)
Transcription machinery [BR:
cteg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91990682 (I308_103826)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
91990682 (I308_103826)
Ribosome biogenesis [BR:
cteg03009
]
Eukaryotic type
Pre-60S particles
RNases
91990682 (I308_103826)
Transfer RNA biogenesis [BR:
cteg03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
91990682 (I308_103826)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
91990682
NCBI-ProteinID:
XP_066613709
LinkDB
All DBs
Position
6:complement(<825166..>828936)
Genome browser
AA seq
1132 aa
AA seq
DB search
MGVPALFRWLSKKYPKIVERVKEDTPKKIRGPDGEIVEEPIRYENPNPNGFEVDNLYLDM
NGIVHPCTHPEGRPAPETEEEMMVEIFKYTERVVNMCRPRKVLMMAIDGVAPRAKMNQQR
SRRFRAAQEAADKEEERKEAVKLFEAMGHTVSEETANRKSWDTNAITPGTPFMDLLSISL
KYWVSYKLTTDPGWKDLKIILSDSSVPGEGEHKIMDWIRRQRSYPTWDANTSHVIYGLDA
DLIMLSLATHEPHFRVLREDVFAQSSKGPPACKNCGKVGHIAANCKSDKKVKDPNVVEVA
KTEDPKPFIFLDVACLREYLAIELVVPGVPFPFDLELAIDDWIFMIFFVGNDFLPHLPSL
EIREGAIDVLLKIWRAELPRMGGYLTNHGKVNLDRAQVILEGLAKSEDEIFQKRKGDEER
QEHSQKRRRIEEHKRQDEDKAREEGRNALTLNGTEYVAVDNPAATARGGPLHPSLPSRPA
FDLVPKEEAAKPDDQQQRAKKAMAGSNSDIVKNRKAIRMANMSAAQALKAELEGSDDVNI
DDKKAIAQEGKEEDEAVVTVERTEDEEKEQLTKEEARGILEEQGEKEGVDEEIVPSAIQT
DEDEGEAPVGDATMAENDDSVTTNDDEDPTHVPRKRKRSDSDGDKESNEEDEADDEDDDD
DAPPNPEADQPIPKKKLKVNADGTVDYEDDIKLWEPGYRERYYEKKFGVKLSEREFIDKV
TKSYMEGLCWVLEYYYQGVPAWDWFYPYHYAPFAQDFRNVGSMDIKFETSMPFKPFAQLL
GVFPAASRIHLPEPLQTLMIDEDSPILDFYPPDFEIDMNGKKMAWQGVALLPFIDQNRLL
TALKSKEELLSDDEKRRNSWGDNVMFIANENPLYDVFCDKLYGLRAKDVSKPIPIDTKAS
YGMTGSVLPDPNCVPASTFDTPIPSISECPDLNPNDSISVRYYFPRQAHPHRSILLRGYR
SEPARLTESDKDWVRRGGQGGRRGHRHGGGGNGNVTGGPGMARGRYESGPPRTNGYQQPP
PRSNYGGGSGYGYGAPAPLPSRPPISSYGGGAGGYGYGNPYAAAPNPYAGGYGAPAPYAA
GGYGQRPYAPPLPPPSPYSAPPPTYGRPPAGGYGYGAPPPKGGGYNPYTSRR
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttccagctctctttcgatggctttctaagaagtaccccaagatcgtcgagcga
gttaaagaggacactccaaagaagatcagaggtccagatggcgaaattgttgaggagcca
ataagatatgaaaatcccaatcccaacgggttcgaggtggataacctttatctggatatg
aacggtatcgtgcatccctgtacgcaccccgaaggccgaccggcaccagagacagaagag
gaaatgatggtggagattttcaagtatacggaaagggtagtcaacatgtgcaggccgaga
aaagtcttgatgatggctatcgatggtgtcgctcctcgagccaagatgaatcaacagcgt
tctcgtcgattcagggccgcccaagaagccgcagacaaggaagaagagaggaaagaggct
gtcaaattgtttgaagccatgggccacaccgtttcagaagagacagccaaccgcaagagc
tgggataccaacgcaatcacccctggtacaccattcatggaccttctctcaatatcacta
aaatactgggtgtcctacaagctcacaactgatcctggatggaaagacctcaaaatcatc
ctttctgactcatccgttcccggtgagggtgagcacaagatcatggactggattcgtcgt
cagcgaagctatcccacatgggacgccaacacgtcacatgtcatctacggtttggacgct
gatttgattatgctttcacttgctacccacgagcctcatttccgggttcttcgagaagat
gtcttcgcacaaagttctaaggggcctcctgcttgcaaaaactgtggcaaagttggtcat
atcgctgcgaattgtaagagcgataaaaaggtcaaagatcccaatgtcgtcgaagttgct
aaaacggaggaccccaaacctttcatcttccttgatgtggcttgcttacgcgagtatttg
gcaattgagcttgttgtaccaggagtgcctttcccatttgacctcgaattggcgattgat
gactggattttcatgattttcttcgtcggtaacgatttcttgcctcatctgccgagtttg
gaaattcgtgaaggtgccattgatgtgctgctcaagatttggagggcagagctaccgagg
atgggtggttaccttaccaaccacggcaaggtcaatctcgaccgtgctcaagttattttg
gaagggctggccaagtctgaggacgaaatcttccagaagagaaagggtgatgaagagcgt
caggagcattcccagaagcgcagaaggattgaagagcataagcgacaggatgaggacaag
gcgcgtgaagaagggcgcaatgctttgaccttgaacggcacagagtacgttgccgttgat
aaccccgctgcaactgctcgtggcggtcctctccacccatcattgccatctcgaccggcg
ttcgacctcgtccccaaagaggaagcggcaaagcccgatgatcaacagcaaagagcaaag
aaggcaatggctggctccaactcggacatagttaaaaatcgtaaggctatcaggatggca
aatatgagtgcggctcaggcactcaaagctgagttggagggtagtgatgacgtgaatatc
gacgacaaaaaggcgatcgctcaagaaggaaaggaagaggatgaagcggttgtgactgtt
gagaggacggaagacgaggaaaaggaacagttgacaaaagaggaagcaagagggattttg
gaagagcaaggcgagaaggaaggggttgacgaggagatagtcccttccgctatccagaca
gacgaagatgagggtgaggcgcctgtcggcgatgccaccatggccgagaatgacgactct
gttaccaccaacgacgacgaggatcccacacatgtcccccgcaagaggaagaggagcgat
tccgatggtgataaggagagcaatgaggaggatgaggcggacgacgaagatgatgatgac
gatgcaccacctaatcccgaagccgaccagcctattccgaagaaaaagctcaaggtcaat
gctgacggaacagtcgattatgaagatgatatcaagctgtgggaacccggatacagagaa
aggtattacgagaagaagtttggtgtgaaattgtcagagagagaatttattgacaaggtt
accaagtcgtacatggaaggactctgctgggttcttgaatattattaccagggtgttcct
gcctgggattggttctatccttatcactatgctccctttgctcaagactttcgcaatgtt
gggtctatggacatcaaatttgagaccagtatgcctttcaagccgtttgctcagcttttg
ggtgttttcccagccgctagccgaattcatttgcctgaaccgttacagactctcatgatt
gacgaagactcacccatcctcgacttctaccctcccgactttgagatcgacatgaacggc
aaaaaaatggcttggcaaggcgtcgctcttttgccatttatcgaccagaatcgtctcttg
acggctttgaagagcaaggaggagcttctgtctgatgacgagaagaggagaaatagttgg
ggagacaatgttatgttcatcgcgaacgagaatccgttgtatgatgtattctgtgataag
ttgtatggtttaagagcgaaggacgtgagcaagcctataccaattgacaccaaagcttcg
tacggcatgactggttctgttctacccgatcccaactgtgttcctgcgtccacatttgac
actcctattcccagcatttccgaatgccctgatcttaatcccaacgactctatatccgtc
cgatattacttccctcgccaagcgcatcctcatcgatcgattctgctgagaggatacagg
tccgagcctgcgagactgacggaaagcgacaaagattgggttcgtcgtggtggtcaaggt
ggaagaagaggtcacaggcatggcggtggtgggaacggaaatgtaaccggtggtccgggt
atggcgagaggaaggtacgagagtgggccgccacggaccaatggctaccaacaacctcca
cctaggtcgaattatgggggtggctctggttacggctacggcgcccctgcacctctgccg
tcaagaccgcctatatcatcgtatggtggtggagccggcggatatggctacggtaatccc
tatgctgcagcgccgaatccttatgccggaggttatggagcaccggcaccttatgccgca
ggaggttatggtcagcgtccttacgcaccaccgctgcctccacccagcccatactctgcc
ccaccgccgacttatggcagacctcctgcgggaggatatggttatggtgctcctccgcct
aaaggcggcggttacaatccttatacctccaggaggtag
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