Cryptococcus tetragattii: 91992822
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Entry
91992822 CDS
T10981
Symbol
I308_105967
Name
(RefSeq) endoribonuclease YSH1
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91992822 (I308_105967)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cteg03021
]
91992822 (I308_105967)
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91992822 (I308_105967)
Transcription machinery [BR:
cteg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91992822 (I308_105967)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
91992822 (I308_105967)
U7-dependent histone pre-mRNA processing factors
91992822 (I308_105967)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
91992822
NCBI-ProteinID:
XP_066611720
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All DBs
Position
11:<709188..>712235
Genome browser
AA seq
778 aa
AA seq
DB search
MIPRRHHFKPAPQPTVQVLQPPDEDAPSLTITMLGAGQEVGRSCCVIEHRGKKIVCDAGL
HPAQPGIGALPFIDELDWSTVDALLITHFHVDHAAALPYIMEKTNFKDGNGKVYMTHATK
AIYGLTMMDTVRLNDQNPDTSGRLYDEADVQSSWQSTIAVDYHQDIVIAGGLRFTPYHAG
HVLGASMFLIEIAGLKILYTGDYSREEDRHLVMAEIPPVKPDVMICESTFGVHTLPDRKE
KEEQFTTLVANIVRRGGRCLMPIPSFGNGQELALLLDEYWNDHPELQNIPVYFASSLFQR
GMRVYKTYVHTMNANIRSRFARRDNPFDFRFVKWLKDPQKLRENKGPCVIMSSPQFMSFG
LSRDLLEEWAPDSKNGVIVTGYSIEGTMARTLLSEPDHIESLKGGNIPRRLTVKEISFGA
HVDYAQNSKFIQEIGAQHVVLVHGEASQMGRLRAALRDTYAAKGQEINIHTPKNCEPLTL
TFRQERMVKAIGSLASTRPEHGTSVKGLLVSKDFSYTLLSPADLHDFTGLSTSTIIQKQG
VAISVDWAVVRWYLEGMYGEVEEGIDEEGKPAFTIMNGVQVVQISPTAVELRWKSSSSND
MIADSALALLLGIDGSPATAKLTASPNKHACNHSHSQSHSHSDLHSNTYPGDKSAKVVAS
NPEFERLRMFLEAHFGHVEGPNLRPPLAQGADGDKNKNGENDKGGDDWLTMDVKLDNHTA
RIDLISMRVESESAELQKRVETVLEMALTTVKSLSQTFLGGGLDIDMVEKVEPSGSDS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgataccaagacgccaccatttcaagccggctccacaaccaacagtacaagtcctccaa
cccccggacgaagatgccccttcactcacaattaccatgctcggcgcaggccaggaagtc
ggcaggtcctgctgtgtcatagagcacagaggaaagaaaattgtatgcgatgctggtcta
cacccagcacaacctggtataggagctctgccattcatcgatgaacttgattggtcgact
gtggatgccttgttaattactcatttccatgtagaccatgcggcggctttgccttatatt
atggagaagaccaattttaaagatggtaacgggaaggtgtacatgacgcacgctacaaaa
gctatctatggattgactatgatggacactgtacgactaaacgatcaaaatccagacact
tccggtcgtctatacgacgaagctgacgttcagtcatcctggcaatccaccatagcagtt
gattatcatcaagatatcgtcatcgccggtggcctcagatttaccccctaccatgctggc
cacgtccttggagcgtccatgttcctcatcgagattgctgggttgaagatcttgtataca
ggagattattctcgagaggaggataggcatctggtgatggcggagattccacccgtgaaa
cctgatgtgatgatttgcgagagcacgttcggcgtgcatacattaccagataggaaggag
aaggaggagcagttcacaacgttagtcgccaatatcgtccgaagaggtgggcgatgcctc
atgcctatcccttcctttggaaacggccaagaactcgcacttctccttgacgaatattgg
aatgaccaccccgaactccaaaacatccccgtctactttgcctcctccctcttccaacgc
ggtatgcgtgtttacaaaacctatgttcatactatgaacgccaatatccgatcgcgattc
gccaggcgtgataacccatttgatttcaggtttgtcaaatggttaaaagatccccagaag
cttagggagaataagggcccatgtgtgatcatgtcttcacctcagtttatgagttttggg
ctcagtcgtgatttgctggaagaatgggcgccggattctaagaatggggtgattgtcact
gggtactctatcgagggcactatggccaggactctcttaagtgaaccggaccacatcgaa
tccctcaaaggaggcaatatccctcgccgcctaacagttaaagaaatttctttcggcgcc
cacgtcgattacgcccaaaattcaaaattcatccaagaaataggtgctcagcacgttgtc
ctagtgcacggagaagcttcacaaatggggagattgagagcggcgttgagagacacgtat
gcggccaaggggcaggaaattaatatccatacgccaaagaattgtgaacctttgaccctt
acttttagacaagaacggatggtcaaggctatcggatctttagcatccactcggcctgaa
cacggtacctctgtcaaaggccttctcgtctccaaagacttttcctacactctcctctcc
cccgccgatttacatgatttcacgggtctttcgacgagcacgatcatccagaagcagggg
gtggcgataagtgtagattgggcggtggtgaggtggtatttggaggggatgtatggggag
gtggaggaaggtattgacgaagagggcaaacctgcttttaccattatgaacggtgttcaa
gtggtgcagatatctccaaccgccgtagaactacgatggaaatcaagttcgagtaacgat
atgattgccgattcggctttggcattgttgttgggtatagatgggagccctgctacagct
aaactcaccgcatcacctaacaaacacgcctgtaaccattcccattcccaatcacactcc
cattccgacctgcattccaatacctacccgggcgacaaatccgccaaagtagtagcttcc
aaccccgaattcgaaagattacgcatgttccttgaagcgcatttcggccatgtagaggga
ccgaatttgagaccaccccttgctcaaggagcggatggggacaaaaataaaaatggggag
aacgataagggcggggacgattggctgactatggatgtgaagcttgataatcacacggcg
cggatagatctgatttccatgcgcgtggaatctgaatcagctgagcttcagaaacgcgta
gaaacagtattggagatggcgttgacaactgtcaagtctctgtcacaaacatttttggga
gggggactggacatcgatatggtggagaaggtggagcctagtgggagtgatagttga
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