Cryptococcus tetragattii: 91993206
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Entry
91993206 CDS
T10981
Symbol
I308_106351
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03018
RNA degradation
cteg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91993206 (I308_106351)
09123 Folding, sorting and degradation
03018 RNA degradation
91993206 (I308_106351)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91993206 (I308_106351)
03041 Spliceosome [BR:
cteg03041
]
91993206 (I308_106351)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91993206 (I308_106351)
mRNA degradation factors
5'-3' decay
Lsm complex
91993206 (I308_106351)
Spliceosome [BR:
cteg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
91993206 (I308_106351)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
91993206
NCBI-ProteinID:
XP_066611054
UniProt:
A0ABR3BIZ5
LinkDB
All DBs
Position
13
Genome browser
AA seq
88 aa
AA seq
DB search
MSSPEPQDESQPISGSPSEFLRNIVGKRVKVRIGSGVDYTGVLTCLDGYMNVALEQAEEW
AGEVKTAVYGDCFLRGNNVLYISALEDL
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgccagaaccccaggatgaatcgcaacccatttccggatccccttccgaattc
cttcgaaacattgttggcaagcgtgttaaggttagaataggaagcggagtggactacacc
ggtgttttaacatgtttggacggatacatgaatgtcgctcttgagcaagcagaggagtgg
gcaggagaggtgaagactgctgtttatggtgattgtttcttgcgaggtaacaacgtcctc
tacatctcagcattggaagacttatag
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