Cryptococcus tetragattii: 91993469
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Entry
91993469 CDS
T10981
Symbol
I308_106614
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
cteg Cryptococcus tetragattii
Pathway
cteg03018
RNA degradation
cteg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cteg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91993469 (I308_106614)
09123 Folding, sorting and degradation
03018 RNA degradation
91993469 (I308_106614)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cteg03019
]
91993469 (I308_106614)
03041 Spliceosome [BR:
cteg03041
]
91993469 (I308_106614)
Messenger RNA biogenesis [BR:
cteg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
91993469 (I308_106614)
mRNA degradation factors
5'-3' decay
Lsm complex
91993469 (I308_106614)
Spliceosome [BR:
cteg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
91993469 (I308_106614)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
91993469
NCBI-ProteinID:
XP_066610862
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All DBs
Position
14:276486..277148
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AA seq
106 aa
AA seq
DB search
MSSRGGRGGARGGGNQGVERKKRESILNLAQFVDKSIRVKFMGGREATGILKGYDQLMNL
VMDDVVEEYEDGRPTRSLGLVVLRGPNIVLVSPTDGSSEIENPFQQ
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagaggcggccgaggcggagctcgtggcggtggtaaccaaggagttgaacgt
aagaagcgagagtcaatcctcaacttggctcaatttgtcgacaagagtatcagggtcaag
tttatgggtggacgggaagccaccggtattttgaaaggctacgaccagcttatgaacttg
gtcatggacgatgtagttgaggagtatgaggatggccgacctacacgaagtcttggatta
gttgttctccgtggccccaatattgtccttgtcagcccaacggacggatcgtcagaaatc
gaaaaccctttccaacaataa
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