Citrobacter telavivensis: GBC03_04945
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Entry
GBC03_04945 CDS
T07059
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ctel
Citrobacter telavivensis
Pathway
ctel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBC03_04945 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctel03019
]
GBC03_04945 (recQ)
03400 DNA repair and recombination proteins [BR:
ctel03400
]
GBC03_04945 (recQ)
Enzymes [BR:
ctel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GBC03_04945 (recQ)
Messenger RNA biogenesis [BR:
ctel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBC03_04945 (recQ)
DNA repair and recombination proteins [BR:
ctel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GBC03_04945 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QFS69599
LinkDB
All DBs
Position
575064..576893
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AA seq
609 aa
AA seq
DB search
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTVVSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFVAL
TATADETTRLDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANSQRIRELAHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAHHSALQLTEAARPVLRGDVALQLAVPRIVALKPRVMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtgttgaatctggaatcaggtgctaaacaggttttgcaagaaacc
tttggctaccaacagtttcgcccgggtcaggaagcgatcatcgacaccgtcgtttcgggg
cgcgactgcctggtcgtgatgccgaccgggggcggaaaatccctctgctatcaaatccct
gccttattgctcaacggtctgaccgtagtcgtttcgccgctgatctccctgatgaaagat
caggtcgaccaactgttggcgaacggcgtggcggccgcctgtctgaactcgacgcaaacc
cgcgagcagcagcttgaggtgatgacagggtgtcgcaccgggcaaatccgtctgctctat
atcgcccctgaacgcctgatgctggataacttccttgagcatctggcgcactggaatccg
gtgttactggccgtggacgaagcgcactgcatctcgcagtgggggcatgacttccgcccg
gaatatgccgcactcgggcagctcagacagcgttttcctgcactgccgttcgtcgcgctg
accgcgacagctgatgaaaccacgcggctggacattgttcgcctgctggggctgaacgat
cccttaatccagatcagcagttttgaccggccaaacattcgctacatgctgatggagaag
tttaaaccgctcgatcagttgatgcgctatgtgcaggaacagcgcggtaaatccgggatt
atttactgcaacagccgtgcgaaggtggaagacaccgccgcgcgtctgcaaagccggggt
attagcgccgccgcgtaccatgcggggctggaaaatcacatccgtgccgacgtgcaggag
aaattccagcgcgacgatctgcaaatcgtggtggcgaccgtcgcctttggcatgggcatc
aacaaacccaacgtgcgttttgtggtgcatttcgatattccccgcaacattgaatcttac
taccaggaaaccggtcgcgccgggcgtgacggcctgcctgcggaggcaatgctgttttac
gatccggcggatatggcgtggctgcgccgctgtctggaagaaaaaccgcaggggcagcta
caggatattgaacggcataagctaaacgcgatgggcgcgtttgccgaggcgcaaacctgc
cgtcgtctggtgctgcttaactacttcggtgaaggacgtcaggagccgtgcggcaactgc
gatatctgtctcgatccgccaaaacagtacgacggtctgatggatgcgcgcaaagcgctg
tcgacgatttatcgcgttaaccagcgcttcgggatgggctacgtcgtggaggtgctgcgc
ggcgcgaatagtcagcgtatccgcgaactggcacacgataaactgccggtgtatggcatt
ggtcgtgagcagagccacgaacactgggtgagcgtgatccgccagttgattcacctgggg
ctggtgacgcagaacattgctcaccattcggcgctccagctcaccgaagccgcgcgtccg
gtgctgcgcggcgacgtcgcgctgcaactcgccgtgccgcgtattgtcgccctgaaaccg
cgcgtgatgcagaaatcctttggcggcaattacgatcgcaaactgttcgccaaactgcgc
aagctgcgtaaagccattgccgatgaagagaacatcccgccatacgtcgtctttaacgat
gccacgctgattgagatggcggaacagatgccggtttccgcgagcgaaatgctcagcgtc
aacggggtgggaatgcgtaaactggagcgcttcggtaaagagtttatggcgctgatccgc
gcccacgtcgatggtgatgacgaagagtag
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