Citrobacter telavivensis: GBC03_09505
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Entry
GBC03_09505 CDS
T07059
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ctel
Citrobacter telavivensis
Pathway
ctel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GBC03_09505 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctel03400
]
GBC03_09505 (recB)
Enzymes [BR:
ctel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GBC03_09505 (recB)
DNA repair and recombination proteins [BR:
ctel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GBC03_09505 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QFS70427
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All DBs
Position
1541444..1544989
Genome browser
AA seq
1181 aa
AA seq
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MNDVAESLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSTAFPRPLTVEELL
VVTFTEAATDELRGRIRSNIHELRIACLRESTDNPLYARLLDEIDDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLSRDIA
QVVFETWKGPQALLADINRYLQGEAPVIKAPPPDDETLASRHQQIVQRINALKQQWCDAV
GELEGLMEASDIDRRKFNRGNQGKWIEKISVWAQSGTQSYQLPEALEKFSQRFLEDRTKE
GGAVPQHPLFVAIDELLSEPLTLRDLLITRALAEIRETVAKEKRRRGELGFDDMLSRLDG
ALRSESGDALAAAIRARFPVAMIDEFQDTDPQQYRIFRRIWQHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARGEVSAHYTLDTNWRSAPGMVNSVNRLFGLMDDAFMFREIPFQPVKY
ADKNQSLRFEFHGETQPAMTMWLMQGESCGVGDYQSYMAQVCAAQIRDWLKAGLSGEAIL
FNGKDARPVSAADISVLVRSRQEAALVRDALTHLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPEKENTLRSALATSMMGLNARDIDMLNDNENAWDQVVEEFVGYRQIWQKRGVMPM
LRALMSTRKIAENLLATAGGERRLTDILHISELLQEAASQLESEHALVRWLSQHILEPDS
NAYSQQMRLESDNHLVQIVTIHKSKGLEYPLVWLPFITHFRIQDQAFYHDRNSFEAVLDL
SEADESVALAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGR
LLQKGEPMDAAGLRAAIEAVCDENIICLVPEAVSMEPLPVTAASGASLNARRVQRTPGDS
WRVTSYSGLQQRGHGIAQDLMPRLDIDATGVGEVVEEPELTPHQFPRGASPGTFLHSLFE
DLDFTQPVEAAWVQDKLALGGYDAGWEPVITAWVTAILHAPLNETGISLSQLSAREKQVE
MEFYLPISQPLIAERLDALIRQFDPLSADCPPLEFAQVRGMLKGFIDLVFRHNGRYYLLD
YKSNWLGENSSAYTPQAMATAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGGVIY
LFLRGVDSEQPQQGIYTTRPSEELIARMDEMFAGVALEDAS
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtcgccgagtcccttgatcccctgcgcttgcccctcacgggcgagcgcctg
attgaagcctctgcgggcaccggcaaaacctttactatcgcggcgctctatctgcgtctg
ctcctcggacttggcggttccactgcctttccccgtcccctgaccgttgaagaactgctg
gtggtgacctttaccgaggccgccaccgacgagttgcgtggtcgcatccgcagtaatatt
catgagctgcggatagcctgtctgcgcgaatcgaccgacaatcccctttatgcccgtctg
ctggacgagatcgacgataaaaagcaggcggctcagtggctgctgctcgccgagagacag
atggatgaggcggcggtgttcaccatccacggtttttgtcagcgcatgctgagtctgaat
gccttcgaatccggcatgttgtttgagcaacagttgatcgaagatgaatctctgctgcgc
taccaggcctgcgcggatttttggcgtcgacactgttaccccttatcacgtgacattgcc
caggtagtgtttgaaacgtggaaaggaccgcaggcgctgctggcagatattaaccgttac
ctgcaaggggaagcgccggtcatcaaagcgccgccgccggatgatgaaacgctggcgtcc
cgtcatcaacagatcgtgcagcgaatcaacgcgcttaaacaacagtggtgtgacgcggtg
ggtgagcttgagggattgatggaagcctcagacatcgaccggcgtaaatttaatcgtggc
aaccagggtaaatggatcgagaagatcagcgtctgggctcaatccgggacgcaaagctac
cagttgccagaggcactggagaaattctcgcagcgttttcttgaggatcgcaccaaagaa
ggcggtgctgtgccgcagcatccgctgtttgtcgcgatagatgaactgttgtcagaacct
ttgaccctcagagatctgctgatcacccgtgcgctggcggagatccgtgagacggtggcg
aaagaaaaacgtcgccggggtgagctgggatttgacgatatgctcagtcgactggatggc
gcgctgcgcagtgaaagcggcgatgcgctggcagcggcgattcgagcccgcttcccggtg
gcgatgatcgatgagttccaggataccgatccgcaacaataccgcattttccgtcgcatc
tggcagcatcagccggacaccgcgctgttgctgataggcgaccccaagcaggcgatttat
gcgtttcgcggcgcggatatttttacctatatgaaggcccgcggtgaggtcagcgcgcac
tataccctcgacaccaactggcgttccgcgccgggcatggtgaacagcgtcaacaggctg
ttcggcctgatggacgatgcctttatgtttcgcgagatcccgtttcagccggtgaaatac
gccgataaaaatcagtcgctgcgttttgaatttcatggcgaaactcagcccgcgatgacg
atgtggctgatgcaaggggaaagctgcggagtaggggattatcaaagctatatggcgcag
gtgtgcgccgcgcagatccgcgactggctgaaggccgggttgagcggtgaggcgatactt
ttcaacggcaaggatgcgcgtccggtgagtgcggcggatatcagcgtgctggtacgtagc
cgtcaggaagcggcgctggtgcgcgacgccctgacgcatctggcgatcccttccgtgtat
ctttccaaccgcgacagcgtgtttgaaacgctggaagcgcaggagatgctctgggtttta
caggcggtgatggcaccggaaaaggaaaatacgctgcgtagcgcactggcaacctccatg
atggggttgaacgcgcgcgacattgacatgctcaacgacaatgaaaatgcctgggatcag
gtggtcgaagagtttgtcggctaccgccagatctggcagaaacggggcgtgatgccgatg
ctgcgcgcgctgatgtcgacgcgaaagattgcggaaaatctgctggcgacggcggggggc
gaacgtcgcctgaccgatattttgcacattagcgagttgttgcaggaggcggcttcgcaa
ctggaaagcgagcatgcactggtacgctggctttcgcagcatattcttgagcctgacagc
aacgcctacagccagcaaatgcgcctggaaagcgacaaccatctggtgcaaatcgtcact
atccataagtcaaaagggctggagtatccgctggtctggctgccgtttatcactcatttc
cgcattcaggatcaggcgttttatcacgatcgcaactcgtttgaagcggtactggatctg
agcgaagcggacgaaagcgtggcgctggcagaagccgaacggttggcggaagatctgcgt
ttactgtacgtggcgctgacccgttcagtctggcactgtagtctgggcgtcgcccctctg
gtgcgtcgtcggggcgataaaaagggcgataccgatgtgcatcagagcgcgctggggcgt
ctgctgcaaaagggcgaaccgatggatgccgccgggctacgcgcggcgatagaggcggtt
tgcgatgagaacatcatctgtcttgtcccggaagcggtcagcatggagccgttgcccgtc
actgcggcgagcggggcgtcgctgaatgcccgacgagtacaacgaacgcctggcgacagt
tggcgggtgaccagttattctggcctgcaacagcgcggtcatggtattgcgcaggatctc
atgccgcgactggatatcgatgcgactggcgtcggtgaggtggttgaggaacctgaactg
acgccgcaccagtttccgcgcggtgcgtcgccggggacgtttttacacagcctgtttgaa
gatctcgattttacccaaccggtagaggctgcctgggtgcaggacaaactggcgcttggc
ggttatgacgccggttgggagccggtgattaccgcgtgggtgacggccattctccatgcg
ccgctgaatgagacaggcatcagcctgagccaactgtctgcgcgtgaaaaacaggtcgag
atggagttttatctgcccattagccaaccgcttatcgcggagaggctggatgcgctgatc
cgtcagtttgacccgctttcggcggactgcccgccgctggagttcgcccaggttcgcggg
atgctcaagggctttatcgatctggtgtttcgtcacaacgggcgctattacctgctggat
tacaaatcgaactggctgggtgaaaacagctcggcttacaccccacaggcgatggccacg
gcaatgcaggcgcatcgctacgatttgcagtatcagctctataccctcgcgctgcaccgg
tatttgcgccatcgcattgcggattacgactacgagcgccattttggcggcgtgatttat
ctgttcctgcgcggtgtggacagcgaacagccgcagcaggggatttacaccacccgcccg
tctgaggagctgattgcccggatggacgagatgtttgccggtgtggcactggaggacgca
tcgtga
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