Citrobacter telavivensis: GBC03_10850
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Entry
GBC03_10850 CDS
T07059
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ctel
Citrobacter telavivensis
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctel03009
]
GBC03_10850 (srmB)
Enzymes [BR:
ctel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GBC03_10850 (srmB)
Ribosome biogenesis [BR:
ctel03009
]
Prokaryotic type
rRNA helicases
GBC03_10850 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
DUF561
CMS1
Motif
Other DBs
NCBI-ProteinID:
QFS70667
LinkDB
All DBs
Position
complement(1816065..1817399)
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AA seq
444 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLMQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSATPSTRERKKIHQWYYRADNFEHKFELLK
HLLKQDDATRTIVFVRKRERVHELAEKLRLAGINNCYLEGEMAQVKRNEGINRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
LKIGRYIEEPLKSRVIDELRPTSRAPSEKMTGKPSKKTLAKREEKKKEKDKDKPRVKKRH
RDTKNIGKRRKPSTATTPQESNEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagcctgctggatgccctccag
gaaaaaggtttcactcgcccgaccgccattcaggctgccgccattccgcctgcgctcgaa
ggccgtgacgtactcggttctgcgccgacaggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgactttccgcgtaaaaaatccggtccgccgcgtattttg
atcctgacgccgacacgcgaactggcaatgcaggtcgccgatcatgcccgtgaactggcc
aaaaacacccacctggatatcgcgacgattaccggcggcgtagcgtacatgaaccacgcc
gaagtgttcagcgaaaaccaggatatcgtggtcgccaccaccgggcgtctgatgcagtat
attaaagaagagaattttgactgccgcgccgtggaaacgctgatcctcgacgaagctgac
cgaatgctggatatgggctttgcccaggacatcgagcacatcgccggggaaacgcgctgg
cgtaaacagactatgctgttctccgccacgctggaaggcgatgcgattaaagatttcgcc
gagcgtctgctggaagagccggttgaagtctctgcgacaccatcaacccgcgagcgtaag
aagattcatcagtggtattaccgtgcggataacttcgagcacaaattcgaactgctgaag
cacctgctgaaacaagacgacgccacccgtaccatcgtatttgtccgcaaacgtgagcgc
gtgcacgaactggctgaaaaactgcgtctggcggggatcaacaactgctatctcgaaggt
gagatggcgcaagtcaagcgtaacgaaggtattaatcgtcttactgacggtcgcgttaac
gtgctggttgccaccgacgttgccgcgcgtggaatcgatattccagacgtcagccacgtg
attaacttcgacatgccgcgtagcggagacacctatctgcaccgtattggccgtacgggc
cgcgccggtcgcaaggggacggcaatctcgctggttgaagcgcacgatcacctgctgctg
ctgaaaattggtcgctatatcgaagaaccgctgaaatcacgggtgattgatgagttgcgt
ccaacttcacgcgcgccgagcgaaaagatgacgggcaaaccgtcgaagaaaacgctcgcg
aaacgcgaagagaagaaaaaagagaaagacaaagataaaccgcgtgtgaaaaaacgccat
cgcgataccaaaaacattggtaaacgtcgcaagccgagtacggcaacgacaccgcaggaa
tcaaacgaagaataa
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