Citrobacter telavivensis: GBC03_16450
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Entry
GBC03_16450 CDS
T07059
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ctel
Citrobacter telavivensis
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctel03032
]
GBC03_16450 (topA)
03400 DNA repair and recombination proteins [BR:
ctel03400
]
GBC03_16450 (topA)
Enzymes [BR:
ctel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GBC03_16450 (topA)
DNA replication proteins [BR:
ctel03032
]
Prokaryotic type
DNA Topoisomerases
GBC03_16450 (topA)
DNA repair and recombination proteins [BR:
ctel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GBC03_16450 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QFS71677
LinkDB
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Position
2955355..2957952
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDESRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTTTPSGDALPLQVTH
QNDKPFRPVNREQTLAAVSLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIGDNFGKKYLPESPNQYASKEN
SQEAHEAIRPSDVSVLAETLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDALSLVELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMENSLDQVANHETEWKGVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELFRFRDRLPEKLRYLADAPQQDPEGNKTLVRFSRKTKQQYV
AAEKDGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgactacgtggttaagtccagcgttggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgcgctcgtcaaccgtatgggggttgatccgtggcacaactgggac
gcgcactatgaggtgctgcccggtaaagagaaggtcgtctctgaactgaaacaactggct
gaaaaagccgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcggtggtgatgagtcgcgttacagtcgcgtggtgtttaac
gaaattacgaagaatgcgattcgtcaggcatttgaaaagccgggcgaactgaacattgat
cgagtaaacgctcagcaggcgcgtcgctttatggaccgcgtggtggggtatatggtctcg
ccgctgttgtggaagaagattgcccgcggcctgtcagctggtcgcgtacagtccgtggcg
gtgcgtctggtcgttgagcgtgagcgcgaaattaaagcgtttgttccggaagagttctgg
gaaattgacgccaacaccactacgccttccggcgacgcgctgcccttgcaggtgacccat
cagaacgataagccgttccgtccggtgaatcgcgagcagacgcttgcggcggtgagcctg
ctggagaaagcgcgctacagcgttctggaacgtgaagacaagccgaccagcagcaagccg
ggcgcgccgtttatcacctccaccctgcaacaggcggccagtacgcgtctcggttttggt
gtgaaaaagaccatgatgatggcgcagcgtctgtacgaagcgggctacatcacttatatg
cgtaccgactcgaccaacctgagtcaggacgccgtaaacatggtgcgcggttatatcggc
gacaattttggcaagaaatatttgccagaaagtccgaatcagtacgccagcaaagaaaac
tcacaggaagcgcacgaagcgattcgtccttctgatgtctccgtgctggcggaaacgctg
aaggatatggaagccgatgcgcagaaactgtatcaactgatctggcgtcagtttgtcgcc
tgtcagatgacgccggcgcagtacgactccaccacgctgaccgttggcgcgggcgatttc
cgtctgaaggcgcgcggtcgtattcttcgcttcgacggctggacgaaggtgatgccagcg
ctgcgtaaaggtgacgaagaccggacgctgccggcagtcaataaaggcgatgcgctgtct
ctggttgaactgaccccggctcagcacttcaccaaaccaccggcgcgcttcagcgaagcc
tcgctggtgaaagagctggaaaaacgtggaattggccgcccgtcgacctatgcgtcgatc
atttcgaccatccaggatcgtggctatgtgcgcgtggaaaaccgtcgcttctatgcggaa
aaaatgggtgagattgtcaccgaccgcctggaagagaatttccgcgagctgatgaactac
gatttcaccgcgcagatggaaaacagcctcgatcaggtcgcgaatcacgaaaccgaatgg
aaaggcgtgctcgacaacttcttcagtgattttactcagcaactggacaaagctgagaag
gatccggaagaaggggggatgcgtccgaaccagatggtgttgaccagcatcgactgccca
acctgcgggcgtaaaatggggattcgtaccgccagtaccggcgtgttcctcggttgctcc
ggctatgcgctgtcgccgaaagagcgctgcaaaaccaccattaatctggtgccggaaaac
gaagtcctgaacgtgctggaaggtgatgacgcggaaaccaatgccctgcgcgccaagcgt
cgttgtcagaagtgcggcacggcgatggacagctacctgatcgatccgaagcgtaagctg
cacgtctgtggtaataacccgacctgcgacggctacgagatcgaagagggcgaattccgc
atcaaagggtatgacggtccaatcgtcgagtgcgaaaaatgtggttctgagatgcacctg
aagatggggcgtttcggtaagtacatggcctgtaccaacgacgagtgcaaaaacacccgt
aaaatcctgcgtaacggtgaggttgcgccgccgaaagaagatccggttccgctgccagag
ttgccgtgtgaaaaatcggatgcgtatttcgtgctgcgtgatggtgccgccggggtgttc
ctggccgccaataccttcccgaaatcccgtgaaacgcgtgcgccgctggtggaagagttg
ttccgcttccgtgaccgcctgccggaaaaactgcgttatctggccgatgcgcctcagcag
gatcctgaaggcaataaaacgctggtgcgttttagccgtaagaccaagcagcagtatgtt
gccgctgaaaaggacgggaaagcgaccggctggtcagccttctttgttgatggcaaatgg
gttgaaggcaagaagtaa
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