Citrobacter telavivensis: GBC03_16515
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Entry
GBC03_16515 CDS
T07059
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ctel
Citrobacter telavivensis
Pathway
ctel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GBC03_16515 (pdeR)
Enzymes [BR:
ctel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
GBC03_16515 (pdeR)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_8
PAS_4
GGDEF_2
PAS_10
GCH_III
Motif
Other DBs
NCBI-ProteinID:
QFS71690
LinkDB
All DBs
Position
complement(2969204..2971198)
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AA seq
664 aa
AA seq
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MKDILESATLYSYMGTHTPYWRLSEDSNTLHLSVTEATDRTESVELAPEQAERIREMTVI
TSSLMMTLPFDNNDIPVHLVGRKISKHEWAGSASAWHDTPSVARDLVKGLSFAEQVVSEA
NSAIVILDSRGNIQRFNRLCEEYTGLKEQEVIGQSVFKLFMSRREAAASRRNISGFFRNG
NSYEVELWVQTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHELINDAIDQAVGDSQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLA
LLSCLDENQVLARLGGDEFIVLASQTSQSSLEAVASRILTRLRQPFRIGLIEVYTGCSVG
IALAPQHGESSGDLIRNADTAMYTVKEGGRGQFCVFSPEMNERVFEYLWLDTNLRKALEN
DQLLIHYQPKVTWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVILDV
VRQVAKWRDKGINLRVAVNISARQLADQTIFTDLKRVLHELNFEYCPIDVELTESCLIEN
EALALSVIQQFSQLGAQVHLDDFGTGYSSLSQLTRFPIDAIKLDQIFVRDIHKKSVSQSM
VRAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPATVFERWYKRYLN
KKKR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacattctggagtccgcaacgttgtatagctatatgggcactcacacgccttac
tggcgtttgtcagaagattccaacaccctgcatttgtccgtcaccgaagcgaccgaccgt
acggaaagcgttgaacttgcgcccgagcaagccgaacggatccgcgaaatgaccgttatc
acatccagcctgatgatgacgctcccctttgacaacaacgatatcccggtgcatctggtg
ggccgtaaaatcagcaagcatgaatgggcgggcagcgcatcggcctggcacgatacccct
tccgtggcgcgcgatctggtcaaagggctgtcgtttgctgaacaggtagtgtctgaagcc
aactctgccattgtgatcctcgacagccggggcaacattcagcgcttcaaccgcctgtgt
gaagagtacaccgggctaaaagagcaagaagtgattgggcagagcgtcttcaaactcttt
atgagtcgtcgggaggccgccgcctctcgtcgcaacatcagcggcttctttcgcaacggc
aattcgtatgaagttgaactctgggtacagacccgcaagggccagcggctgtttctgttt
cgcaacaaatttgtccacagcggcagcgggaagaatgaaatctatctgatctgctccggc
actgacattacggaagaacggcgcgcgcaggaacgattacgcgtgctggcgaataccgac
acgattaccggtttgccaaaccgcaatgctattcatgagctgatcaatgacgccatcgat
caggcggttggagacagccaggtgggcattgtctatctcgacctggataatttcaaaaag
gtgaacgatgcctatggtcacatgtttggtgatcagcttttacaggcggtgtcattagcg
cttctgagttgtctggatgaaaatcaagtgctggcccgcctcggcggtgatgagtttatt
gtactggccagccagacatcccagagctcgcttgaggcggtcgcctcgcggatcctcacc
cgattgcgccagcccttccgtatcggcctgatagaagtctatacgggctgttctgtcggt
atcgcgttggcgcctcagcacggtgagagcagcggcgacctgatccgcaatgccgatacc
gcgatgtacaccgtaaaagaaggcggacgcggccagttctgcgtcttctcgccggagatg
aacgagcgggtattcgaatacctgtggctggacactaacctgcgtaaagcgctggaaaac
gatcagttgctgattcactatcagccgaaagtgacctggcgaggcgaagtccgcagcctt
gaggcgctggtgcgctggcagtcccctgaacgcgggctaatccctccgctggagttcatc
tcttacgccgaggagtccgggctgattgtgccactcggccgctgggtgatcctcgacgtt
gtgcgccaggtcgcgaaatggcgtgataaaggcatcaacctgcgcgtggcggttaacatt
tctgcccgccaactggccgaccagacgatattcaccgatctgaagcgagtgttgcacgag
ctcaattttgaatattgtcctatcgatgtcgaactgacggagagctgcctgattgaaaac
gaagcgcttgcgctgtccgtcattcagcagtttagccagctcggtgcccaggtgcatctg
gatgactttggcaccggctattcctcgctttcgcagctgacgcgttttccgattgatgcc
atcaagctggatcagatttttgttcgcgacattcacaagaaatcggtatcgcagtcgatg
gtccgtgcgattgtcgccgtggcgcaggcgttgaatctacaggtgattgccgaaggcgtg
gagagcgccaaagaggatgcttttttgacgaaaaacggcgttaatgagcgacagggcttt
ttatttgccaaaccaatgcctgccaccgtgtttgagcgctggtacaaacgttatctcaat
aagaaaaagcgttaa
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