Citrobacter telavivensis: GBC03_16520
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Entry
GBC03_16520 CDS
T07059
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ctel
Citrobacter telavivensis
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctel03016
]
GBC03_16520
Enzymes [BR:
ctel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GBC03_16520
Transfer RNA biogenesis [BR:
ctel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GBC03_16520
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
ODP
Motif
Other DBs
NCBI-ProteinID:
QFS71691
LinkDB
All DBs
Position
complement(2971447..2973381)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHTEKDRESAEPEELVEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVEH
EFKEGDWAVAEMRRHPLKGDRTFYAELTQFITFADDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELTDGKLQLTVAIADPTAWIAEGSK
LDNAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTIAADGAIEDDITF
FAATIESKAKLAYDNVSDWLENSGSWQPEREEIAQQIRLLQRICLNRGEWRHHHALVFKD
RPDYRFILGDKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHLGFD
PANADALAALLQSHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGESISRPQEEVTVQMAERRRLNRM
AERDVGDWLYARFLSDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTIQIKGETVYKVTDVIDVTIAEVRMETRSLIARPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgtgccgaaggggtggtaaaagccacggaaaagggctttggcttcctggaagtcgatgcg
caaaaaagttatttcatcccaccgccgcagatgaaaaaagtgatgcatggcgaccgaatc
atcgccgtcatccacactgaaaaagatcgtgaatctgcggagccggaagaactggttgag
ccgttcctgacccgttttgtcggtaaagtgcagggtaagaacgatcgcctgtccatcgtg
ccggatcatccgctgttaaaagacgctatcccctgccgcgccgcgcgcggtgtggaacat
gaatttaaagagggtgactgggccgttgctgaaatgcgccgtcatccactcaaaggcgac
cgcaccttctacgccgaattaacccagttcatcactttcgctgacgaccacttcgtaccg
tggtgggtcaccctggcacgtcacaatcttgaaaaagaagcgccagacggcgtggcgacg
gaaatgctggatgaaggtctggaacgccaggatcttaccgcgctgaattttgtcaccatc
gacagtgccagcactgaagatatggacgatgcgctgtatgccgaagaactgaccgacggc
aagctacagctgaccgtggcgattgccgatcctaccgcctggatagccgaaggcagcaag
ctggataacgccgcgaaaatccgtgcgttcaccaactatttgccgggcttcaacattcca
atgctgccgcgcgaactgtctgacgatctctgctcgctgcgcgccaatgaagtgcgcccg
gtgctcgcctgtcgcatgaccattgccgcggatggcgccattgaagatgacatcacgttc
ttcgccgccacgattgagtcgaaagcaaaactggcttacgacaacgtctctgactggctg
gaaaatagcggtagctggcagcctgagcgcgaagaaatcgcacagcagattcgcctgctg
caacgtatctgcctgaaccgcggcgagtggcgccatcaccatgcgctggtgtttaaagat
cgccctgactaccgcttcattctcggcgacaaaggcgaagtgctcgatatcgtcgcggaa
ccgcgccgtatcgcgaaccggattgtcgaagagtcaatgattgccgccaacatctgcgcc
gcacgcgtgctacgcgacaaactcggctttggcatttacaacgttcacttgggctttgat
ccggccaatgctgatgcgctggcggcgctgctgcaatcccacgggatgcatgtggacgcc
gaagaggtattgaccctcgaaggcttctgcaaactgcgtcgtgaactggatgcgcaaccg
tcgggtttcctcgacagccgtattcgtcgcttccagtcctttgcggaaatcagcaccgag
ccggggccgcacttcgggctgggtctggaggcttacgccacctggacttcaccgattcgt
aagtatggcgatatgatcaaccatcgcctgcttaaagcagtcatcaaaggtgaaagtatt
agccgtccgcaggaagaggtaaccgtacagatggcagaacgccgtcgcctgaaccgtatg
gcggaacgcgatgttggtgactggttgtatgcccgtttcctcagcgataaggccggtacg
gatacccgcttcgcggcggagatcatcgatgtcagccgtggcgggatgcgtgtccgcctg
gtggataacggcgcggttgcttttatccccgcgccattcctgcacgcggtgcgtgacgaa
ctggtgtgcagccaggaaaacggcaccatccagatcaaaggcgaaaccgtctacaaagtg
accgatgtgattgatgtcaccatcgccgaagtgcggatggaaacccgtagcctcatcgcc
cgtccagccgcctga
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