KEGG   Citrobacter telavivensis: GBC03_18195
Entry
GBC03_18195       CDS       T07059                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ctel  Citrobacter telavivensis
Brite
KEGG Orthology (KO) [BR:ctel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctel03400]
    GBC03_18195
Enzymes [BR:ctel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GBC03_18195
    5.6.2.6  RNA 3'-5' helicase
     GBC03_18195
DNA repair and recombination proteins [BR:ctel03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GBC03_18195
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C ResIII AbiEi_4 PhoH
Other DBs
NCBI-ProteinID: QFS72004
LinkDB
Position
3336493..3341172
AA seq 1559 aa
MSANNASPPLPDIFSQATRDWFISAFQHPTLVQSQTWAVTATNQHALVIAPTGSGKTLAA
FLYALDRLFREGEEKPTTPLSGKEKKVTRILYISPIKALGTDVQRNLQIPLQGISEERKK
CGATEVTIRVGIRTGDTPPQERAKLSRHPPDILITTPESLYLMLTSRARESLRGIETVIV
DEVHAVAGTKRGAHLALSLERLDALLTRSAQRIGLSATVRSVTEVAAFLGGDRPVTVVNP
PATRHPDIRIVAPAANLDDVLADNSDSSDAIHKGREGSVWPRIESGILDQILRHRSTIVF
TNSRGLAEKLTARLNELYLSRRHAPPESQAEPVHYDSSTGSTSNRAQDAGEYIARSHHGS
VSKEQRAVTEHALKSGELRCVVATSSLELGIDMGAVDLVIQVATPLSVASGLQRIGRASH
QVGGVSKGLFYPRTRRDLIDSAVIVECMYAGQLETLTPPRNPLDILAQQTVATVSMDPVN
VDDWYALVRRASPWKALPRGAFDATLDMLAGRYPSGDFAVFRPRIIWNRETGLLTARPGA
QLLAVTSGGTIPDRGMFSVLLPEGDEQAGSRRVGELDEEMVYESRVNDIITLGASSWRIQ
QITRDQVIVVPAPGRSARLPFWRGEGVGRPAELGERIGDFIHTLSDDNAERQLSPRLRDD
NVLSNIKGLINDQKNATGVLPWSRHLVLERCRDEMGDWRVILHSPYGRRVHAPWALAIAG
RLHAQWGADASIVASDDGIVARIPDSDGKLPDAAIFLFDPEKLLRIVREAVSSTALFAAR
FRECAARALLMPGRTPGRRSPLWQQRLRASQLLEIAAGYPDFPIILETARECLQDVYDLD
ALEQVIRRLNTGEIQISEVTTPAPSPFATDLLFGYVAEFMYATDVPLAERRASVLALDSE
LLGNLLGQGDPLELLDPEIIRQVEDELQRRATGRKAQGMEGVYDLLRELGPMTIEDIAAR
HEATIADIGPWLDGLTADKRIFPVVIAGTAQMACMDDAARLRDALGVRLPATISAAWLHP
VNTPLRDLFMRFSRTHTLFTGDQIAQAFGLGVAVADDLLRQLRDEGVLIQLRTGASSTPN
DARSSTWVNEDIFHRLRIRSLHAAREATRPVPAASYTRLLLERHGLISPADGSPARLPAS
SAGMLEGSDGVTRVIEQLAGLGLPASLWESQIFPARVRDYSPDMLDELLATGEVIWSGQK
KLGDDDGRVVLHLRDYLAETLSPPSGDSESLSDLQRAILDVLSGGGAWFAQQLSALIQAR
TQRSGNDEWITPATLHEALWGLVWQGYITTDIWAPLRGLSRTVSASRQPSRRSPRMRRGR
PVYASTRPTSVSVPVSYTTPALAGRWSLLPRETLNDTERMLACAENMLDRYGVIGRQAVI
AENVPGGFPAMQTLCRSMEDSGRILRGRFVEGMGGAQFAERPTIDRLRDLTSSNTEHQAF
TAVALSANDPANPWGALLPWPTHPSSLVPGRRNGAFVVISAGQLRLYLAQGGKKMMVWSE
NEETISAEIFRALASALRREPRLRFTLTEVNDKPVRQTRLFTLLREVGFSSSPQGLDWG
NT seq 4680 nt   +upstreamnt  +downstreamnt
atgtcagcaaacaatgcgtcgcccccactgccggatattttctcgcaggcgacccgcgac
tggtttatctcggcatttcagcatcccacgctggtgcagtcgcaaacgtgggccgttacc
gcgacgaatcaacatgcgctggtgatcgccccgaccggttcggggaaaacccttgccgcg
tttctctacgcactggatcgcctgtttcgtgaaggtgaggaaaagcccacgacgccgctc
tccggcaaagaaaagaaagtcacccgcatcctctatatttctccgataaaagccctcggc
acggatgttcagcgcaatctgcaaattccccttcaggggattagcgaagagcggaagaaa
tgcggcgcgacagaggtgaccattcgggtcggtatccgtacaggagatacgccacctcag
gagcgtgcgaagctcagtcgtcatccgcccgatattctgatcaccacgccggagtcgctt
tatctgatgctcacctcgcgcgccagagagtcgctgcgcgggattgaaacggtgatcgtc
gatgaagtacacgcggtggcaggcacaaaacgtggtgcgcacctcgcgctcagccttgaa
cgactggatgcgcttctgacgaggtcggcgcagcgtattggtctgtcggcgacggtgcgt
tccgttacggaggttgcggcttttctgggcggcgatcgcccggttaccgtggtcaatccc
cccgcgactcgtcacccggatatccgcattgttgcacctgccgccaatctggatgacgtc
ttagccgataatagtgacagcagcgatgccattcacaaaggcagagaaggttccgtctgg
ccgcgcattgaatccggtattctcgatcaaatccttcgccatcgctccactattgtcttc
accaactcgcgcgggctggcggaaaaactgacggctcgtctgaatgaactctatctctcg
cgacgacacgccccccctgaatcgcaggcggaacccgtacactatgactcgtcaaccggt
tccaccagcaatcgggcgcaggacgccggagaatacattgcccgctcgcatcacggttca
gtttccaaagagcagcgggccgtcacggagcatgccctgaaatcaggcgaacttcgctgt
gtggtggcgacgtcaagtctggagctggggatcgacatgggcgccgttgatctggtgatt
caggtggcaacgcccctttcagtcgccagcggcctgcagcgcatcggacgagccagccac
caggttggcggcgtctcgaaggggctattctatcccagaactcgccgggatctgattgat
tcggcggtgattgtcgagtgcatgtacgccgggcaactggagaccctgacgcctccgcgc
aacccgctggatattctggcgcaacaaaccgtggccaccgtttccatggatccggtcaat
gtcgatgactggtatgccctcgtccgccgggcttctccatggaaagcgctgccaagaggc
gcgtttgacgccacgctggatatgctggcgggacgctatccctctggcgattttgcggta
ttccgaccgcgtattatctggaaccgcgaaaccgggttattaacggcacgccccggcgca
caacttctggcggtgaccagcggtggtaccattccggaccgtggcatgttcagcgtgctg
ctccccgaaggggatgaacaagcgggatcgcggcgcgtgggcgaactggatgaagagatg
gtgtatgagtctcgcgtcaacgacatcattacgcttggtgccagttcgtggcgtattcaa
cagatcacccgcgatcaggttatcgtcgtccctgcgcctggacgctcggccaggcttccg
ttctggcgcggcgaaggcgtcgggcgtcctgcggaactgggggaacgtattggtgatttc
atccataccctgtccgatgacaacgcggagcgacaactctccccccgactgcgcgacgat
aatgttttatcgaatatcaaagggttaattaacgatcaaaagaatgccacgggcgtgctc
ccctggagccgtcatctggtacttgaacgctgtcgtgatgagatgggtgactggcgggtc
attctgcattcgccttatggccgtcgggtacatgccccctgggcccttgcgattgccgga
cgcctccatgcgcaatggggggctgacgcgtcgattgtcgccagcgatgacgggattgtc
gcccgcattccggacagcgacggaaagctgccggatgccgccatttttctgttcgatccg
gaaaaactgttgcgcattgtccgggaagccgtcagcagcacggcgctgtttgccgcccgc
ttcagagaatgcgccgcccgcgctctgctgatgcctggccgcacgccgggacgtcgctcc
ccactctggcagcagcgcctgcgcgccagccagcttctggaaattgcagcgggctatcct
gactttcccattattctggaaaccgcccgagaatgcctccaggacgtctacgatcttgac
gcgctcgagcaggtcatacgccgcctgaacaccggcgagatccagatatctgaagtcacc
acgcccgctccttcgccgtttgccaccgatctgttgtttggttatgtcgcggaatttatg
tacgccaccgacgttccactggcggagcggcgggcctcggtactggcgctggacagcgaa
ctgctgggcaacctgttaggccagggcgatccgctggagttgctcgacccggagattatc
cgccaggtagaggatgaacttcagcggcgggcgacgggcagaaaagcccagggaatggaa
ggcgtttacgatttgctgcgcgaactggggccaatgaccatcgaggatattgcggccagg
cacgaagcaacgatcgctgacatcgggccctggctcgatggcctgacggctgacaagcgt
attttcccggttgttattgcaggtactgcgcagatggcctgcatggatgacgcggccaga
cttcgtgatgcactgggtgtccgcctgccagcgacgatttcggctgcatggttgcatccg
gtgaacacaccgctgcgggacctcttcatgcgcttcagccgcacccatacgctctttacc
ggcgatcagattgcgcaggcgttcgggttgggtgtagccgtcgccgacgatctcctgcgc
cagttacgcgatgagggcgtcctgatccaactgcggacgggggcgtcatccactcccaac
gacgcgcgttcttcaacgtgggtgaatgaagacatatttcatcggctgcgcatccgctcg
ctgcatgccgccagagaagcaacccgccctgtcccggcggcgagctacacccgcctgctg
ctggaacgtcatgggctcatttcacccgccgacggcagcccggcgcgcctcccggcgtcc
tcagcgggaatgctggaaggaagtgacggtgtcacgagagttattgaacaactggccgga
ctcggcctgcccgcctcactgtgggaaagccagattttccctgcccgggtcagagactat
tcgccggacatgctcgatgagctgcttgcaaccggtgaagtcatctggtcagggcaaaag
aaactgggtgatgatgacggacgagtggtactgcatctacgggattatctggcggagacg
ctttccccgccatccggtgacagcgagtcactttcagacttacagcgcgccattttagac
gtcctctcaggcggcggcgcatggtttgcacagcaactcagtgcgttgattcaggcccgg
acgcaaaggtctggcaatgatgagtggataacgccagccacgctgcatgaggccctttgg
gggctggtctggcaagggtacatcacaaccgatatctgggccccgctacgaggcctgtcg
cgcactgtctctgcgtcacgtcagccgtcgcgacgctcaccgcgtatgcgtcgtggacgc
cctgtctatgcctcaactcgccccacgtcagtttccgtaccggtttcttacaccactcct
gcgctggccggacgctggtcactgctgccgcgagagacgttaaatgataccgagcgaatg
ttggcctgcgcggagaatatgctcgatcgctacggcgtgatcggtcggcaggcggtgatt
gcggagaatgtccctggggggtttcctgccatgcagaccctgtgtcgaagcatggaggat
tcgggacgcattctacgagggcgtttcgttgagggaatgggcggtgcgcagtttgccgag
cggcctactatcgatcgccttcgcgatcttacctcatcgaatactgaacatcaggctttt
acggcggtggcgttatccgcaaacgacccggccaatccctggggcgcgcttctgccgtgg
ccgacgcatccgtcgtctctggtccctggacgccgtaatggcgcatttgtcgttatttct
gccggccagctgcggctgtatctcgctcagggcgggaaaaagatgatggtctggagcgaa
aatgaggagacgatttcagcggaaatattcagggcgttggcgagtgctttacgccgtgag
ccgcgacttcgttttaccctgacagaagttaacgataaaccggtccggcaaacccgtctg
tttaccctgcttcgggaggtcgggttttccagttcgccgcagggacttgactgggggtag

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