Citrobacter telavivensis: GBC03_24905
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Entry
GBC03_24905 CDS
T07059
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ctel
Citrobacter telavivensis
Pathway
ctel03030
DNA replication
ctel03430
Mismatch repair
ctel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GBC03_24905 (dnaE)
03430 Mismatch repair
GBC03_24905 (dnaE)
03440 Homologous recombination
GBC03_24905 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctel03032
]
GBC03_24905 (dnaE)
03400 DNA repair and recombination proteins [BR:
ctel03400
]
GBC03_24905 (dnaE)
Enzymes [BR:
ctel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GBC03_24905 (dnaE)
DNA replication proteins [BR:
ctel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GBC03_24905 (dnaE)
DNA repair and recombination proteins [BR:
ctel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GBC03_24905 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QFS73212
LinkDB
All DBs
Position
complement(4689889..4693371)
Genome browser
AA seq
1160 aa
AA seq
DB search
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVQSEQMGDELTHLTVLAANNTGYQNLTLLISKAYQRGYGAAGPIIDRDW
LIELKEGLILLSGGRMGDVGRSLLRGNSALVEECVAFYEEHFPDCYFLELIRTGRPDEET
YLHAAVKLAESRGLPVVATNDVRFINSEDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVQKSKEGL
EERLEFLFPDEAERKEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKHGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAIKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacctcgtttcgtccacctgcgggtgcacagcgactattccatgatcgatggg
ctggcgaaaaccgggccgctggtgaaaaaggcggccgcgttaggcatgcctgcactggcg
atcaccgattttacgaacctctgtggtctggtgaagttctacggagcgggtcatggcgca
gggattaaacccattgttggcgctgacttccatgttcagagtgagcagatgggcgatgaa
ctcacgcatctgacggtactcgccgcgaataacaccggttatcaaaatctcaccctgctg
atctccaaagcctatcagcgcggttatggtgcggcggggccgatcatcgaccgcgactgg
ctgatcgagctgaaagaagggttgatcctgctctccggcggccgaatgggtgacgtcggg
cgtagcctgctgcgcggcaatagcgcgctggtggaagagtgtgtcgctttctacgaagag
cacttcccggactgttacttccttgagctgatccgtaccggtcgaccggatgaagagacc
tatctgcatgcggccgttaagttggcggaatcgcgggggttgccggtggtggccaccaac
gacgtgcgctttatcaacagtgaagactttgacgcgcatgaaatccgcgtcgccattcac
gatggctttacactcgacgatcccaagcgtccgcgcaactattcggcgcagcagtatatg
cgctcggaagaggagatgtgcgagctcttctccgacattccggaagcgctggaaaacacc
gtcgaaattgccaaacgctgcaacgtaacggtgcgtctgggcgaatacttcctgccgcag
ttcccgaccggcgatatgaccacggaagatttcctggtacagaaatcgaaagagggtctg
gaagagcgtctggaattcttgttcccggatgaagccgagcggaaagagaaacgtccgccg
tacgatgaacgcctggacattgagctacaggtgatcaaccagatggggttcccaggctac
ttcctcatcgtgatggagtttatccagtggtcgaaagacaacggcgtgccggtaggccct
ggccgtggttccggtgcgggatcgctggtggcctatgcgctgaaaatcaccgacctcgat
ccgctggaatttgacctgctgttcgaacgtttccttaacccggaacgtgtctccatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggtgattgaacacgttgcggac
atgtacggtcgtgatgcggtatcgcagataattaccttcggtacgatggcggcgaaagcg
gttattcgcgacgtgggccgtgtactgggccatccgtatggttttgtcgacaggatttcg
aagctggtaccgcctgatcctgggatgacgctggcgaaagccttcgaagctgaaccgcaa
ctgccagaaatttacgaggcagatgaagaagttaaagcgctgatcgacatggcgcgtaag
ctggaaggcgtgacccgtaacgccggtaaacatgccggtggggtggttatcgcaccgacg
aaaatcaccgattttgcgccgctgtactgtgatgaacaggggctgcatccggttacccag
tttgataaaaacgatgtggaatatgccggcctcgtgaagttcgacttcctcggcctgcgt
acgctcaccatcatcaactgggcgctggagatgatcaacgcccgccgcgagaagcacggc
gagccgccgctggatattgccgctatcccgctggacgacaagaaaagtttcgatatgctg
caacgctcggaaactacggcggtcttccagcttgaatcccgcggcatgaaagacctgatt
aagcgtctgcagcctgactgcttcgaagatatgatagccctggtggccttgttccgtccg
gggccgttgcagtccgggatggtggataacttcatcgaccgtaagcacgggcgtgaagag
atttcctatcctgacgtgcagtggcaacacgaaagcctgaaaccggtactggagccgacc
tacggcatcatcctgtatcaggaacaggtcatgcagattgctcaggtgctctctggctat
acccttggcggcgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcaccttcgaagaaggggcgataaagaacggcgttgacggcgaactg
gcaatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatcgcac
tctgctgcctacgcgctggtctcttaccagacgctgtggctgaaagcacactatcctgcc
gagtttatggcggcggtcatgaccgctgatatggacaacaccgagaaggtggttggactg
gtggacgaatgctggcgcatggggctgaagatcctgccgcccgatatcaactccgggctg
tatcacttccacgtcaacgacgacggcgagattgtttacggtatcggcgcgatcaaaggc
gtgggggaaggtccgatcgaggcgatcattgaggcgcgtaacaacggcggctacttccgc
gagttgttcgatctttgcgcgcgcaccgataccaaaaagctcaaccgtcgggtgctggaa
aaactgatcatgtccggggcgtttgacaggctggggccgcatcgcgccgcactgatgaac
tcgctgggcgatgcgctgaaagccgccgaccagcacgcgaaagcggaagcgattggccag
gcggatatgttcggtgtgctggcagaagagccggagcaaattgaacagtcctacgccagc
tgccagccgtggccggaacaggtggtgttagatggggaacgtgaaacgttggggctgtac
ctgacgggtcaccctatcaatcagtatttgaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgacagaacgtggtaaagtgaccacggctgcggggctcgtc
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccggacgtctggaggtgatgttatttaccgacgccctggataaataccagcaa
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcacgtgcgcggttgcgttttggcgcaacgtggcgtgtctctccgagcgat
cgtttgctaaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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