Citrobacter telavivensis: GBC03_27985
Help
Entry
GBC03_27985 CDS
T07059
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ctel
Citrobacter telavivensis
Pathway
ctel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBC03_27985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctel03019
]
GBC03_27985
03009 Ribosome biogenesis [BR:
ctel03009
]
GBC03_27985
Enzymes [BR:
ctel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GBC03_27985
Messenger RNA biogenesis [BR:
ctel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GBC03_27985
Ribosome biogenesis [BR:
ctel03009
]
Prokaryotic type
rRNA helicases
GBC03_27985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
QFS73780
LinkDB
All DBs
Position
complement(5320285..5322177)
Genome browser
AA seq
630 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQSECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLAKLQPTAEDEELD
IETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDRPERSGEDR
PRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPK
GMPGEVLQHFTRTRILNKPMNMQLVGDAQPHTERRGGGRSFGGERREGGRGFGGERREGG
RGDGRRFSGERREGSRAPRREDGTSRRRDA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatcaccgatccagtctgagtgtattccacacttg
ctgaacggtcgtgacgtactgggcatggcccagaccggtagcggtaaaactgcagcgttc
tccttaccgctgctcaacaatcttgatcctgagctgaaagcacctcaaatcctggtgctg
gcaccgacccgcgaactggcggttcaggttgccgaagccatgacggatttctctaaacac
atgcgcggcgtgaacgtggttgccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgtcaagggccgcagatcgtcgtcggtacgccgggtcgtctgctggatcacctg
aaacgcggcaccctggacctctctaaactgagcggtctggttctggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggaaggt
catcagaccgctctgttctctgccaccatgccggaagcgattcgtcgcattacccgtcgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtcactacccgtccggacatc
agccagagctactggactgtctggggtatgcgtaagaacgaagcgctagtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgacgctggaa
gtggctgaagcgctggagcgtagcggctataacagcgccgcgctgaatggcgacatgaac
caggcgctgcgtgagcagacgctggaacgtctgaaagatggtcgtctggatatcctgatt
gctaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtggtaaactac
gatatcccgatggattccgagtcttacgttcaccgtattggccgtaccggtcgtgcgggt
cgtgcaggtcgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcaccatgaagctgactattccggaagttgaactgccgaacgcagacctgctgggc
aaacgccgtctggaaaaatttgcggccaaagtacagcaacagctggaaagtagcgatctg
gatcagtaccgtgcgctgctggctaaactgcagccgacagcggaagacgaagagctggat
atcgaaacgctggctgccgctctgctgaaaatggcacagggcgaacgtactctgatcgtt
ccgccagatgcgccgatgcgtccgaagcgtgaattccgcgatcgtgacgatcgtggtccg
cgtgaccgtaacgatcgtggcccgcgtggcgaccgtccagaacgcagcggtgaagaccgt
ccgcgtcgtgaacgtcgtgacgttggcgatatgcaactgtaccgtattgaagtgggtcgt
gatgacggcgtggaagtgcgtcatatcgttggtgcgatcgccaacgaaggcgacatcagc
agccgttacattggtaacatcaagctgttcgcatcgcactccaccatcgaactgccgaaa
ggtatgccgggtgaagtactgcagcactttacgcgtacccgcatccttaacaaaccgatg
aacatgcagttagtgggcgatgcacagccgcacactgaacgtcgtggcggtggtcgtagc
ttcggcggcgaacgtcgtgaaggcggtcgcggtttcggcggtgagcgtcgtgaaggcggt
cgtggtgatggtcgtcgtttcagcggcgaacgtcgtgaaggtagtcgtgcgccacgtcgt
gaagacggtaccagccgtcgtcgtgacgcgtaa
DBGET
integrated database retrieval system
