Yamadazyma tenuis: 18245475
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Entry
18245475 CDS
T03099
Symbol
TAF5, PSN45_003606
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cten
Yamadazyma tenuis
Pathway
cten03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18245475 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
18245475 (TAF5)
03036 Chromosome and associated proteins [BR:
cten03036
]
18245475 (TAF5)
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18245475 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
18245475 (TAF5)
Chromosome and associated proteins [BR:
cten03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
18245475 (TAF5)
STAGA complex
18245475 (TAF5)
TFTC complex
18245475 (TAF5)
SAGA complex
18245475 (TAF5)
SLIK complex
18245475 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_like
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_IFT140_1st
RMC1_N
PROPPIN
WD40_RFWD3
LisH
Beta-prop_IP5PC_F
eIF2A
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
18245475
NCBI-ProteinID:
XP_006684191
UniProt:
G3AZM1
LinkDB
All DBs
Position
4:complement(1140846..1143146)
Genome browser
AA seq
766 aa
AA seq
DB search
MSEGNNANSAQAGANGTSSNNPGGSQQPVTRSQTAAQQQTQQSRTNQQAQYSQADLNRIV
LEYLNKKGYHRTESMLRLESSNSPTPSVPLPNASNSTLAYPGELGKKDKDRETRETKELK
DKQARIERELRESKDREFRLSKEKELRELKEYEERKKRENDPEIYQICYNTLRKWVETSL
DLYKPELSKLLYPIYIHCYLELMSKNYSNYAKDFFDKFKADHEILHGEELRQLSGISLPE
HLNENDVAQKFRQHKYRIIISKTSMNLLLYFLHENEAVGGAILIRIINQYLNPIIKITQP
DKLELEGEANPEEGIVLGEEEKEIDKFNEQSVSLGKFPLDSDTQQEVEAELKLKDEKSEP
VNGKTLVEEFQSMNEIDDDSPSKDSLPLPMKDASDIKRLLLEVEDSRSKIRLSDIQASCP
SVCMYTFHNSNQELTSLEFNQDSTIVAGGFQDSYIKLWSIDGKPLKSIFKKDRHNNDNSR
KLIGHSGPVYSTSFSPDNRYLISGSEDKTVRLWSLDSFTGLVSYKGHNQPVWDVKFSPLG
HYFATASHDQTARLWATDHIYPLRIFAGHINDVDCVDFHPNSNYVFTGSSDKTCRMWDVQ
TGTPVRVFMGHTGPINTMAISPDGRWLASAGEDSVINIWDIGSGRRLKSMRGHGRSSIYS
LDFSKDNGVLVSGGADNTVRVWDIKKNTSDAGPEPETFSFDDDNNAGANGSTNGSNNQSS
KTSKTNKREVVATSDHMSAYFTKKTPVYKVHFTRRNLCLAAGPFLG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaggaaacaacgccaattctgcacaagcaggcgctaacggcacctccctgaac
aatccaggtgggtctcagcagccggtcacgcgctcccagactgctgctcaacagcagact
cagcaaagtagaactaaccaacaagcccaatattctcaagcggaccttaatagaatcgtg
ttggaatatctcaataagaaagggtaccatcgtactgaatccatgctccggctcgaaagc
tcgaactcgccaactccaagcgttccattgccaaatgccagtaattcgactttggcgtac
ccaggagaattgggaaaaaaggataaagatagagagacccgagaaacaaaggaattaaag
gacaaacaagcccgtattgagcgagaattgagggagagcaaggacagagagttccgatta
tccaaagaaaaagagttaagagagttaaaagagtatgaggaaagaaagaaacgagaaaat
gatcccgaaatctaccagatatgttataatacattaaggaaatgggtagagacttctttg
gacttgtataaaccggaattatccaagttgttgtatcccatttacatccattgctacttg
gagttgatgtccaaaaactactccaattatgcaaaagatttttttgataagttcaaagct
gaccatgagatcttgcatggagaagagctcagacagttgagtggaatctctttgcctgag
catttgaatgaaaatgatgttgcccaaaagttccgtcaacacaagtatcggatcatcatt
tctaaaacttccatgaacttgttgttatactttttacatgaaaatgaggcagttggagga
gcaattttgatccgtataatcaaccagtatttgaacccaatcatcaaaatcacccaaccg
gacaagttggaacttgaaggtgaagccaacccagaagaaggtattgtattgggagaagaa
gaaaaggaaatcgataagttcaatgaacaatccgtatctttgggaaaattccccttagac
tcagatacccaacaagaggtagaggctgaactcaaactcaaagatgaaaagtcagagccg
gtgaatggcaagactttagttgaagaattccaaagcatgaatgagatagatgacgattct
cccagtaaagacagtttaccattgccaatgaaggatgctctggatatcaaacgtctttta
ttggaagttgaagactcgcgcagcaagattcgtcttagtgacattcaagcctcatgtcct
tcagtttgtatgtacacgttccacaatagcaaccaagagttaaccagcttggaattcaac
caagactcgactattgttgccggtgggtttcaggacagttacatcaagttatggagcatt
gacggaaagccattgaaatccattttcaaaaaagaccgccacaacaatgataatagccga
aagctcattggacatagtgggccggtatattctacctccttctctcctgacaacagatac
ttgatcagtggcagtgaagacaaaacggtgcggttatggtcgttggactcttttacgggt
ttagtgtcgtataagggacacaatcagccggtatgggacgtcaagttctctccattgggc
cattattttgccacagcttcccacgaccagacggcccgtttgtgggccaccgaccatatc
tacccattgcgtatctttgccgggcatattaatgatgttgactgcgtcgacttccatccc
aactcgaactacgttttcaccggctcgtcagacaaaacctgtcgtatgtgggatgtacag
accgggacacccgtcagagtgtttatgggacacaccgggcccatcaacacgatggcaatt
tctcccgatggccgttggttggcatcggccggtgaagacagtgtgataaatatctgggat
atcgggtcaggacgtcgtctcaaatccatgagaggtcatggccgctcgtccatctactca
ttggacttttccaaagataatggagtgcttgtgagtggaggagctgataataccgttaga
gtatgggatatcaagaaaaacaccagcgatgccggccctgaacctgagactttcagtttt
gatgatgataacaacgctggtgccaacgggtctaccaacgggtccaacaaccagctgagc
aaaacatcaaaaactaataaaagagaagtggtggctacgtctgaccacatgtccgcgtac
ttcaccaaaaagacgccggtttacaaggttcacttcactagaaggaacttgtgtcttgca
gctggtccatttttgggatag
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integrated database retrieval system
