Yamadazyma tenuis: 18245552
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Entry
18245552 CDS
T03099
Symbol
PSN45_003307
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cten
Yamadazyma tenuis
Pathway
cten03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18245552 (PSN45_003307)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
18245552 (PSN45_003307)
03019 Messenger RNA biogenesis [BR:
cten03019
]
18245552 (PSN45_003307)
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
18245552 (PSN45_003307)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
18245552 (PSN45_003307)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
Pfc11_Clp1_ID
CID
zf_PCFS4
VHS
zf-C2HC_2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
18245552
NCBI-ProteinID:
XP_006684466
UniProt:
G3AYM7
LinkDB
All DBs
Position
4:complement(499732..501264)
Genome browser
AA seq
510 aa
AA seq
DB search
MSEIVQEYAQSLKELTFNSRPIIDTLTTIAAENTDEGDGILDVITARIYKCLPEQKLFAL
YLLDSICKNVGNPYNILIGDDIFKLFSHVYLLVDDNVRKKLQNLFETWRLTKAKGTNIPL
FPPGELEKIGAFLKKAGPVNNGNELSNSRLIRDIDELLPIFHNKLNNNSNDTKLNERFNA
LNQLKFLLQNQKMQPNELKAVEAQLNTIKHQELNRSSTSANSSPNSTPTLRSNIPSSLPA
TPKVNTVPASSANDLFDRLINEGIITFEQDFNSPRVYEINYPKGNPNDHSDVFSSILGYQ
MIRSEYEQLKYNELNKLKVTSQSVQGFISSPNVSIQCKNLLYESKGLKCSICGKRFNTDD
VGKNRKRLHLDWHFRISQKFKSSSNVQSRSWYLDDVDWAKFKDENLLEFQVNIANSTQSS
SQFKPQESKEIPYVIIPSTETNMNNKCLICREQVKGSFNEELGEWCWYNCILQPGEPKGS
RKIVHANCYNETRKRGALEDAHSGLKRERI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagatcgttcaagaatacgcccaaagtttgaaagagttgacattcaactctcgg
cctataatagatacactcacaacaatagctgctgaaaatactgatgaaggggatggaatt
ctagatgtgatcaccgctagaatctacaagtgcttacctgaacagaaactctttgcgtta
tatttacttgattctatctgcaaaaatgttggcaacccgtacaatatcttgataggagat
gatatattcaagcttttcagtcacgtttacctacttgtcgatgataatgtccgaaaaaaa
ttgcaaaatttattcgagacatggcgtttgactaaagctaagggaacaaatataccgtta
ttcccaccgggagaacttgaaaagatcggagctttcctcaaaaaagcgggcccagttaac
aacggaaatgaactaagtaactctaggttaatacgagatattgatgagttgttacctatt
ttccacaataagctaaacaacaattctaatgacactaaactcaatgagagatttaatgca
ttgaaccagttgaagtttttattgcaaaatcagaaaatgcagcccaatgagttgaaggcc
gtcgaagcacagctaaacaccattaaacatcaggaattgaataggtcttcaacttctgca
aactcgagccctaattccactccaactctcagatccaacatcccttcgtctttaccggca
actcctaaagtcaatacggtcccagcaagctctgctaatgacctttttgataggcttatc
aacgaaggtatcatcacctttgagcaagatttcaatagtcctcgggtctacgaaataaac
taccctaaggggaacccaaatgatcactccgatgtcttcagtctgattttgggttatcaa
atgatcaggtctgaatatgagcaactcaagtacaatgaactcaacaagttgaaagtgacc
tcccaatcagtgcaaggattcatttcaagccccaatgtgtctattcagtgcaagaattta
ctttatgagagtaaaggattaaaatgttctatttgtggtaaaagattcaatactgatgat
gttggaaaaaatcgaaaaagattacatttagactggcattttcgtataagccaaaagttc
aaaagttctagcaatgttcaatccagaagctggtacttggatgacgttgactgggccaaa
ttcaaagatgaaaatctccttgaatttcaagtcaacattgctaattctacccaatcttct
tcccaattcaagcctcaggagtcgaaagaaatcccatatgtgataattccttctaccgag
actaatatgaacaataagtgcttgatttgcagggagcaagtaaaaggttcattcaatgag
gagttgggtgaatggtgttggtacaattgtatactacaacccggggaacctaagggaagt
agaaagatagtccatgctaattgttataatgagactcgtaagcgaggagcacttgaagat
gcccactctgggttgaaaagagaaaggatctga
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