Yamadazyma tenuis: 18245666
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Entry
18245666 CDS
T03099
Symbol
SMD2, PSN45_004963
Name
(RefSeq) mRNA splicing protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cten
Yamadazyma tenuis
Pathway
cten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18245666 (SMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cten03041
]
18245666 (SMD2)
03032 DNA replication proteins [BR:
cten03032
]
18245666 (SMD2)
Spliceosome [BR:
cten03041
]
Complex A
U1 snRNP components
Sm proteins
18245666 (SMD2)
U2 snRNP components
18245666 (SMD2)
Complex B
U1 snRNP components
18245666 (SMD2)
U4/U6.U5 tri-snRNP components
18245666 (SMD2)
Complex C
U2 snRNP components
18245666 (SMD2)
DNA replication proteins [BR:
cten03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
18245666 (SMD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SPECT1
Hfq
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
18245666
NCBI-ProteinID:
XP_066014505
LinkDB
All DBs
Position
7:complement(join(389233..389566,389642..389646))
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AA seq
112 aa
AA seq
DB search
MADLVGVPKSDLNQQELERLEEFEFNHGPMSLLKEAVANNTPVVISCRNNHKLVAKVKAF
DRHCNLILENVKELWTEPVKNNKGKVIKVNQKERFVSKLFLRGDSVIVVVKA
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttggtaggggttccaaaatcagatttaaatcaacaagagctcgagaggctt
gaagagttcgaattcaatcatgggccaatgtccctattaaaagaggcggtcgccaacaac
accccggtggtgatttcatgtcgtaacaaccataagcttgttgccaaggtgaaggcattt
gacaggcattgtaacttgattttggaaaacgtcaaagagttgtggacggaaccagtgaag
aacaataaaggaaaagtgataaaggtcaaccagaaggaaagatttgtatcgaagttgttc
ctaagaggtgactctgtgatagtggttgtgaaagcatag
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