Yamadazyma tenuis: 18245825 Help Entry 18245825          CDS       T03099                                  Symbol CDC48, PSN45_003830 Name (RefSeq) AAA ATPase cdc48   KO K13525   transitional endoplasmic reticulum ATPase Organism cten  Yamadazyma tenuis Pathway cten04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:cten00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     18245825 (CDC48)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cten03019]     18245825 (CDC48)    03009 Ribosome biogenesis [BR:cten03009]     18245825 (CDC48)    04131 Membrane trafficking [BR:cten04131]     18245825 (CDC48)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:cten04147]     18245825 (CDC48) Messenger RNA biogenesis [BR:cten03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Ran-mediated transport factors      18245825 (CDC48) Ribosome biogenesis [BR:cten03009]  Eukaryotic type   Pre-60S particles    Ribosome quality control proteins     18245825 (CDC48) Membrane trafficking [BR:cten04131]  SNARE   SNARE associated proteins    Others     18245825 (CDC48)  Autophagy   Aggrephagy    Other aggrephagy associated proteins     18245825 (CDC48) Exosome [BR:cten04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    18245825 (CDC48) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA AAA_lid_3 CDC48_N RuvB_N AAA_2 AAA_5 AAA_16 CDC48_2 AAA_33 TIP49 AAA_22 AAA_14 RNA_helicase nSTAND3 Mg_chelatase AAA_28 AAA_17 IstB_IS21 ATPase Parvo_NS1 AAA_7 NPHP3_N Vps4_C AAA_18 ABC_tran ResIII AAA_24 AAA_25 Sigma54_activat DUF815 AAA_lid_PRS2_C PhoH Zeta_toxin UFD1_N2 Zot Motif Other DBs NCBI-GeneID:  18245825 NCBI-ProteinID:  XP_006686390 UniProt:  G3B345 LinkDB All DBs Position 5:358138..360642 Genome browser AA seq 834 aa AA seqDB search MAADEHKPLLDASGSQSKEDATATAILRRKKKDNALIVDDAVNDDNSVITMSSNTMELLQ LFRGDTVLVKGKKRKDTVLIVLADDDMDDGVARVNRCVRNNLRVRLGDIITVHPCPDIKY ANRISVLPIADTVEGLTGSLFDVYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDP EDFAIVAQDTVIHCEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLF KSIGIKPPKGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAF EEAEKNSPSIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRP NSIDPALRRFGRFDREVDIGVPDAAGRLEILKIHTKNMKLADDVDLEAIASETHGFVGAD VASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRFALGNSNPSALRETVVE NVNVTWDDIGGLDDIKNELKETVEYPVLHPDQYQKFGLAPSKGVLFFGPPGTGKTLLAKA VATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKSRGGSN GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDE PARLSILEAQLRNTPLEPGLNLNEIARITNGFSGADLSYIVQRSAKFAIKDSIEAQIKSK KLKDEKKAEAGEEGTEDVNMKEEEPEEPEEDPVPFITKAHFEEAMKTAKRSVSDAELRRY ESYASQILASRGQYTNFRFSDENGESEVGATGATGEASTGAAFGANDDDDDLYN NT seq 2505 nt NT seq  +upstreamnt  +downstreamnt atggctgctgacgaacacaaaccgttattggacgcctccggatctcaatccaaagaggat gccaccgccaccgccattttacgtagaaaaaagaaggacaatgctttgattgtggatgac gccgtcaacgatgataactctgttatcaccatgtcctccaacaccatggaattgttacaa ttgttcagaggtgacactgttcttgtcaagggtaagaagagaaaggacaccgtcttaatt gttttagccgacgatgatatggatgatggtgttgccagagtcaacagatgtgttcgtaac aacttgagagtcagattgggtgacattatcaccgttcatccatgtcctgatatcaaatat gccaaccggatctccgtgttgccaattgctgacaccgttgaaggtcttactggttctttg tttgatgtgtacttgaagccatactttgttgaggcttacagacccgtcagaaagggtgat ttgttcaccgtcagaggtggtatgagacaagtggagttcaaggtggtggaagtagacccc gaagactttgccatcgtggctcaagataccgtcattcattgtgaaggtgagccaatcaac agagaagatgaagaaaatagtttgaatgaagtgggatacgatgatatcggtggatgcaag aagcaaatggctcaaatcagagagttggttgaattaccattgagacatcctcaattattc aagtccattggtattaagccaccaaaggggattttgatgtatggaccccccggtacgggt aaaaccatcatggccagagctgtggccaatgaaaccggtgcctttttctttttgatcaat ggtcccgaaatcatgtccaagatggcgggtgaatccgaatcgaatttgagaaaggctttt gaagaagcagaaaagaattcgccttcgattattttcattgacgaaatcgattcgattgct ccaaagagagacaaaactaacggggaagttgaaagaagagtggtgtctcaattgttaaca ttgatggatggtatgaaggccagatccaacgttgtggtgattgctgctaccaacagacca aactctattgatccagctttgagaagatttggtagatttgatagagaagttgatattgga gttcctgatgccgccggtagattagaaatcttgaagatccataccaagaacatgaaattg gcagatgatgttgatttagaggccattgcttctgaaacccatggttttgttggtgctgat gttgcctccttatgttctgaggctgccatgcaacaaattcgtgaaaagatggacttgatc gacttggatgaagacactattgatgctgaagttttagactctttgggagttaccatggaa aactttagatttgccttgggtaactccaatccttcggccttgcgtgaaaccgttgttgaa aatgtcaatgttacttgggatgacattggtggtttagacgatatcaagaacgagttgaag gaaactgtggagtacccagttttgcatccagatcaatatcaaaagttcggtttggcccca tccaaaggtgttttgttttttggtcctccaggtactggtaagaccttgttggccaaggcg gttgctactgaagtatctgccaactttatttccgttaagggtcctgaattattgagtatg tggtatggtgaatctgaatccaatattcgtgacattttcgataaggctagagccgctgcc cctacggttgtgtttttagatgaattagattccatcgccaaatctagagggggctctaat ggtgatgctggtggagcttccgaccgtgtggttaatcaattgttgactgaaatggatggt atgaatgctaaaaagaatgtatttgtcattggtgccaccaacaggcccgatcaaatcgac ccagctttattgagaccaggtagattggatcaattgatctatgttccattgccagacgaa ccagctagattgtctattttggaagcacaattgcgtaatactccattagagccaggtttg aacttgaatgaaattgccagaattaccaacggattctcaggtgctgatttgtcgtacatt gttcaaagatcagccaaatttgctattaaagattctattgaggctcaaatcaagtctaag aagttgaaggatgaaaagaaagctgaagctggtgaagaaggtactgaagatgttaacatg aaagaagaagaacctgaagagcccgaagaagaccctgttcctttcataaccaaggcccat ttcgaagaagccatgaagaccgctaagagatcggtttctgatgccgagttgagaagatac gaatcttacgccctgcaaatattagcttctagaggccaatacactaacttcagattctct gatgaaaatggtgaatctgaagtcggtgctactggagccactggagaagccagcaccggt gctgcttttggtgccaatgatgatgatgatgatttatataattag

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