Yamadazyma tenuis: 18245864
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Entry
18245864 CDS
T03099
Symbol
CHC1, PSN45_004628
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
cten
Yamadazyma tenuis
Pathway
cten04142
Lysosome
cten04144
Endocytosis
cten05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18245864 (CHC1)
04142 Lysosome
18245864 (CHC1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
18245864 (CHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cten04131
]
18245864 (CHC1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cten04147
]
18245864 (CHC1)
Membrane trafficking [BR:
cten04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
18245864 (CHC1)
Exosome [BR:
cten04147
]
Exosomal proteins
Proteins found in most exosomes
18245864 (CHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
18245864
NCBI-ProteinID:
XP_006686898
UniProt:
G3B757
LinkDB
All DBs
Position
6:852297..857294
Genome browser
AA seq
1665 aa
AA seq
DB search
MSSDIPIDFTELAQLTSVGIQPASLDFKSTTLESDRYVCVRETGASGNTVAIVDLYNNNE
VTRKNMTADNAIMHPTEFVISLRANGTTIQIFNLGSKQRLKSYTMDEPVVFWKWLNNEYL
GLITGSAVFYWNVFDGTNNGPIKLTERHHSLNNAQIINIVAEPDLNWFAINGIAQEDGRI
AGHIQLFSKTRNVSQAIEGHVSKFASIKLSGAAHPTKVFCVGNKNAQGQGNLHIIEIDHV
DGNPPFPKKSVDIFFPPDATNDFPISLQASDKYGIVYILTKYGFIHLYDMETGSNLFVNR
ITADPVFTASAFKDGTGIITINKAGQVLSVEVSRDRIVPYVLDKLSNVSLALSLSSRGGF
PGAENLFTQQFQNYLNQGDYTNAAKVAASSEQLRTPDTINKLKHITPAPGQISPILQYFS
TLLDRGTLNKYESIELAKPVLQQDRKPLFEKWLKEDKLTSSEELGDIVKSYNDTTLALAV
YIRANVHIKVVSSLAELGQFDKIMPYCQKVGYSPDYTNLIQNLVRVNPDKASEFATSLLQ
TPDSNINVENVADLFFSQNYIQQGTAFLLDALKNDSPAEGHLQTKVLEINLLHAPQVADA
ILGNNMFSHYDKPSIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPNDWLVAYFGQL
TVEQTVACIKELLSNNMQQNLQVIIQVATKYSDLIGPLNLIKIFETYKCTEGEYYYLSSI
VNLTQEPDVVFKYIQCAARMNQPKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVC
DRFNFVHDLILYLYKNQYFKFIEVYVQQVNSANTPQVVAGLLDVDCDETIIKNLLNSVIG
RVPIKELVVEVEKRNRLKILLPFLEATLQGGSNDQEVYNTLAKIYIDSNNSPEKFLQENS
NYDTLVVGKYCEKRDPYLAYISYSKGGNDDELINITNENKMYKYQARYLLAKSDFDLWNK
VLGDDNIHRRQLIDQVISTGIPELDDPEPISLTVKAFMENDLPQELIELLEKIILEPSPF
NDNTSLQGLLILTAIKADPSRVMNYIEKLDKYDPQEIAPLCIDAQLYEEAFEIYDRFELR
TDAMRVLVEDIMSLDRGEQYAEKFNTSELWYQLGTAQLNGLRIPEAIESYVKSKNPENFE
QVIEISERAGKEEELVPFLDMARETLREPLIDGALINCYASLGRLSEIESFVSGPNVADS
ESIGDKLFEAKNYKGAKILYSNVSKYSKLATTLVYLEDYQGAVECARKASNINVWKQVNN
ACIENKEFRLAQICGLNLIIDAEELPELVKTYEWNGYFNELISLFENGLSLERAHMGMFT
ELAILYSKYSPEKVMEHLKLFWSRINIPKVLTACEEAHLYPELIFLYCHYEEWDNAALTM
IEKSEVAFDHLSFKEIIVKAPNLEIYYKAINFYLAENPSLLVDLLSVLAPKLDLPRVVRM
FVKSDNLPLIKPFLISVLEKNNSVVNGAYHDLLIEEDDYKSLKEAIENDAYNRFNSLDLA
ERLENHEIIFFRQISATLYTKNKKFTKSISILKNDKLWPDLIKTAAVSNSTKIAHELLDY
FVETGNHECFVALLYTCYDLIEYDYVIELTWLHNLANFVKPYEISVAAENQKLLNEVYAD
LKKRREAEQQDEDAPINQPLMITNGNAGMAGIGFQPTGAGFGNPY
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatataccaattgatttcaccgaattggcccagctcaccctggttggcatc
cagcccgccagtcttgatttcaagtctactactctcgagtctgatcgttatgtttgtgtt
cgtgaaactggtgcttcgggtaacacggttgccatcgttgacttatacaataacaatgag
gtcaccagaaagaacatgactgctgacaatgccatcatgcatccaacagagtttgtgatt
tccttgagagccaacggcacaaccatacaaatcttcaatcttggcagcaaacaaagattg
aagtcctacactatggatgaaccagtggtgttttggaaatggttaaacaacgaatacttg
ggtttaatcaccggatcggccgtattttactggaacgtctttgatggtaccaacaacggg
cccatcaagttgaccgaaagacaccatagcttgaacaatgctcaaattataaacattgtg
gccgaacctgatttgaattggtttgccatcaacggtattgctcaggaggatggtagaatc
gctggtcacatccagttgttctccaagactcgaaatgtgtctcaggctattgaaggtcat
gtttctaagtttgctctgattaagttgtcaggtgctgctcatcctaccaaggtattctgt
gttggaaacaaaaatgcccaaggccaaggtaacttacacatcattgaaatcgaccatgtg
gacggtaacccaccttttccaaagaaatctgtcgacatcttcttccctccagatgctacc
aatgatttccctataagcttacaagcttctgataaatacggaattgtctacattttaacc
aaatatggttttattcacttgtatgacatggaaaccggatctaacttgtttgtcaatagg
atcactgctgacccagttttcaccgccagtgctttcaaagacggaacaggtataattacc
atcaacaaagctggtcaagtgttgagtgttgaagtttctagagatagaatcgtcccttat
gtcttagacaagttgtccaacgtgtctttggctttatcgctttcatctcgtggaggtttc
cctggtgctgaaaacttgtttactcaacagtttcaaaactacttgaatcaaggtgattac
accaatgccgcaaaggtagctgcctcttcggaacaattgcgtactccagataccatcaac
aaattgaaacacatcactccagcccctggtcaaatctctccaatcttgcaatacttttct
actctattggacagaggtaccttaaataagtacgaatccattgaattggctaagccagtc
ttgcaacaagataggaaaccattgtttgaaaaatggttgaaggaagacaagttaacctct
tcagaagaattgggtgatattgttaagtcttacaatgacaccaccttggctttggctgtt
tacattagagctaatgttcacattaaggtggtttcttctttggctgaattgggccagttt
gacaagattatgccttattgtcaaaaggttggttactcaccagattacaccaacttgatc
caaaacttggttagagtcaaccctgataaggccagtgaattcgcaacttccttgttgcaa
accccagattcaaacataaatgtggaaaacgttgctgatttattcttctcccaaaactat
attcaacaaggtacagcctttttattggatgctttgaagaatgattctccagccgaaggt
cacttacaaaccaaggtgttggaaatcaacttgttgcatgctccacaagttgctgatgcc
atcttgggtaacaacatgtttagtcactacgataaaccaagcattggtaaattgtgtgaa
aagtctggtttgtttcagagagcattggaacattatgatgacttgaaggacattaagaga
gtcattgttcacactaatgtgttacctaatgactggttggtcgcatactttggtcaatta
actgttgagcaaacagttgcttgtatcaaggaattgttatctaacaatatgcaacaaaac
ttgcaagttattatccaagttgcaactaagtattctgacttgattggcccattgaacttg
atcaagatctttgaaacctacaagtgtactgaaggtgaatactactacttgtcgtcaatt
gtcaacttgactcaggaaccagacgtggtgttcaagtacatccaatgtgctgctagaatg
aaccaaccaaaggaaattgaaagagtcgtgagagataacaatgtctacaatggtgaaaaa
gtcaagaacttcttgaaggagttcaaattggatgaccaattacctttgatcattgtttgt
gacagatttaactttgttcacgatttgatcttgtacttgtacaagaaccaatacttcaag
tttattgaagtttacgttcaacaagttaactcagccaacactcctcaagttgttgctggt
ttgttggatgttgactgtgacgaaacaattatcaagaacttgttgaattctgtcattggt
agagttccaatcaaagaattggtagttgaagtcgaaaagagaaacagattgaagatattg
ttaccattcttggaggctaccttacaaggcgggtctaatgatcaagaggtgtataatact
ttggcaaagatttacatcgactccaataactctccagaaaaattcttgcaagagaacagc
aattacgacactttggttgttggtaagtactgtgaaaagagagatccatacttggcttac
atttcttactctaaaggtggaaatgatgatgaattgatcaacatcaccaatgaaaacaaa
atgtacaaataccaagctagatatttgttggccaagtctgatttcgacttgtggaacaag
gttttgggcgatgataacattcataggagacagttgattgaccaagtcatttcaacagga
atccctgaattagatgatccagaacctatttccttgaccgtcaaggctttcatggaaaat
gatttgcctcaagaattgatagagttattggaaaagatcatcttagaaccatctcctttc
aacgacaatacttctttgcaaggtcttttgatcttaacagctatcaaagctgatccatct
cgtgtgatgaactacattgaaaagttggataagtatgatcctcaagaaattgcaccttta
tgtatcgatgctcaattgtacgaagaagctttcgagatctatgacagattcgaattaaga
actgacgccatgagagtcttggttgaagacattatgtccttggacagaggtgaacaatac
gctgagaaattcaacacttcggaattgtggtatcaattgggtactgctcaattgaatggt
ttgcgtattccagaagctattgaatcttatgtcaagtccaagaacccagagaactttgaa
caagtaattgaaatttccgaacgtgctggtaaggaagaagaattggttcctttcttggat
atggctagagaaactttgagagagcctttgattgatggtgctcttatcaactgttacgct
tctttgggtagattgtctgaaattgaactgttcgttagtggtccaaatgttgctgattct
gaatctattggtgataaattatttgaagccaagaactacaagggagctaagatcttgtat
tctaatgtttccaaatactctaagttggccactactttggtttacttggaagattaccaa
ggggctgttgaatgtgccagaaaggcttcgaatattaatgtctggaagcaggtgaacaat
gcttgtattgagaataaggaattcagattagctcagatttgtggtttaaacttgattatc
gatgctgaggaattacccgaattggtcaagacatatgaatggaatggttacttcaacgaa
ttgatttctcttttcgaaaacgggttaagcttagaaagagcccatatgggtatgttcact
gagttggccattttgtattctaagtacagtccagaaaaagtcatggaacacttgaaattg
ttctggtccagaatcaacattccaaaggtgttaactgcctgtgaagaagctcacttgtat
cctgaattgatctttttgtactgtcattacgaagaatgggacaatgctgctttgacaatg
attgaaaaatctgaggttgcctttgatcacttgtcgttcaaggaaatcattgttaaggca
ccaaacttggaaatctactacaaggctatcaacttctacttggctgaaaacccatccttg
ttagttgatttgttgtcagtattggctcctaagttggacttaccaagagtcgttagaatg
tttgtaaagtctgacaacttaccacttatcaaaccattcttgataagtgtgttggaaaag
aacaactcggttgtcaatggtgcataccatgacttgttaatcgaagaagatgactacaag
tccttgaaagaggctattgaaaatgacgcatacaatagattcaactctttggacttggca
gaaagattggaaaatcacgaaatcattttctttagacaaatttcggctacgttatacacc
aagaacaagaagttcacaaaatccatttctatcttaaagaacgataaattatggccagat
ttgatcaaaactgctgctgtgtctaattctactaagattgcccatgaattattggactac
tttgttgaaactggtaaccatgaatgctttgtggccttgttatacacttgttatgatctt
attgaatatgattatgttattgaattgacttggttgcacaacttggccaactttgtcaaa
ccatacgaaatttctgttgctgctgaaaaccagaaattattaaacgaagtttacgctgat
ttaaagaagagaagagaagctgagcaacaagatgaagatgcgcctattaaccaaccatta
atgattacaaatggtaatgccggcatggctggaattgggttccaaccaactggggctgga
tttggcaacccctattaa
DBGET
integrated database retrieval system
