Yamadazyma tenuis: 18245929
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Entry
18245929 CDS
T03099
Symbol
VPS8, PSN45_004579
Name
(RefSeq) Vacuolar protein sorting-associated protein 8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cten
Yamadazyma tenuis
Pathway
cten04138
Autophagy - yeast
cten04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
18245929 (VPS8)
04148 Efferocytosis
18245929 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cten04131
]
18245929 (VPS8)
Membrane trafficking [BR:
cten04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
18245929 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
zf_RING_Vps8_fungal
TPR_VPS8_2
VPS8_N
Beta-prop_VPS8
zf_RING_Vps8
zf-RING_11
WD40
zf-RING_2
zf-RING_Vps41
zf-rbx1
Beta-prop_HPS5
WD40_CDC20-Fz
WD40_WDHD1_1st
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
18245929
NCBI-ProteinID:
XP_006686944
UniProt:
G3B566
LinkDB
All DBs
Position
6:768571..772383
Genome browser
AA seq
1270 aa
AA seq
DB search
MTKKSFDDRSQTRISLSIKAHRSSTTDARPVPLSHSRTFQWSETPAVSVEINSPDFLFKY
GQACYMDSSASLIAIGTERGYVVVFGYHQEVIHVLTPEHTTAIPESPPISSTGYIVNTSV
SSLAISSDSTVVVSGHTNGLIVIWELKSGQELTPPLHQIKPITFQDRFHKNKEGHLSITI
TSIKIFHDNQIVSSDVSGLVFYHHGVKSLLARNYITQKLLGNNDSNGIPSPKYRIYDMDI
LALGNTPQITDSIGMLAVVTGSMVAVLSVFSMDNPNNLYLKTHFKMQVPKAVKLTSDSLA
CTGWFPCMEYEGVVSNAKLAVSWNNCLSILEVDNAILPANFVGVINDLRSKDKSIPTLPI
SRTARKYLKDPIISLKWMSTSSVCCFTHKEVIILYYKNQGHESLKIIGKEPLGYVPNSLD
FKLNKDHISRTFNSSIKLVKMRVLLLNQKHHHSQLAIGKPISWNDKLAELLAKKYYEEAL
NACYFFYSSKGIGELVLFSLPESKAIRKKLVHPYLMKILWQSIPHFSNCAVYFRILATLI
GESKEIDSELTEMIEMLYETVSDKAEFFDSLENYLISGTITTLSPLVLKALVSYYGECGK
GEPLTEILCTINITFLDIDLTIQVCQKNKLDECLIFVYNFLIHDYDTPLLHFLSEIQNNR
VDPRNESKVFNYLSYILTGRQYPIDKFIEYSEEQRAKLRTINILFRHETEFLGIQVKETS
IFPILTMLLKYNSFEMLSTLNEFFEDSILNEEIESSISRQFIIDALLDIYASNDFSNTDK
CHLSIFVGRNYSKYSQFIRLSDSILNQILDNLLNFNHPEIKVDCELAIQSLLTAFEPFDE
KKLIEKLSYKKFYNVLISIYKGEGKYYKVLQIWLNQLDEGHADLTNVKDESFNVLTECFS
NTKLGIDKVNLNTLIKDNFVKLATINTNNFVYIINNYEPSLHKQILKVNEGSVVFSYLDE
LFKLGCNDSELIVKYSECLSQFNSSHLYGFLKAKYQFVEGNDIHNLETILSDAKQINALT
IPLTSEGKYQESLDYLLEQLESIKELEKFDESFKLYLSIIESPGFYSQQQMSTASLALNL
NEQYWLKLIDCLIGLSKEMPTINEFIYKSFRKISDIKLNPNDKNETSFLKIFDTFLNNND
QTTLLNVRNILIEILISYSYESEILRLSYKIINQNIHDKLNVIKYHNLKGWSISCKHCTN
CGKQLYGSHIDLSNFMVWEQRQQTVLNMMSDVKDAESTDQLRLVFFKCNHGYHYKCLRNL
SSDTCVVCTQ
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaagagctttgatgataggtcccaaacacgaataagtctttctatcaaggcc
caccggtcttctaccacagatgcccgccccgtaccgctcagccattcgcgtacgttccaa
tggagcgaaacccccgccgtgtcagtggaaatcaactctcctgacttcctcttcaaatat
ggccaagcatgttatatggactcgtcggcgtcactcatcgccattggcaccgaacggggc
tacgtggtggtgtttggctaccatcaggaagttattcacgtgcttacacccgaacatacc
actgctatacccgagctgccacccatttccctgaccgggtacattgttaatacgtcagtc
tccagcttggcgatatcactggacctgacagtggtggtttctgggcacaccaacggcctc
atagtcatatgggagttgaaatcaggccaggaactcaccccaccactccaccaaatcaaa
cccatcacttttcaagaccgattccacaagaacaaagagggccatttgagtatcaccatc
accagcatcaaaatcttccacgataatcagatcgtgtcaagtgacgtgtcggggctagtg
ttctaccaccacggggtaaagagtcttctcgcccgaaactacataacccagaagttattg
ggtaataacgattcgaatgggattccaagtcccaaatataggatttacgacatggatatc
ttggctcttggtaacactcctcaaatcaccgatctgataggaatgctagccgtcgtcaca
ggactgatggtggcggttttgtcggtgttttcgatggataaccccaataatttgtacctt
aaaacccacttcaaaatgcaagtccccaaagccgtgaaactcacgctggactcattggca
tgcacgggctggttcccgtgcatggagtacgagggagtggtatccaatgccaagttggca
gtttcgtggaacaactgcttgtcgatacttgaggtggacaatgccattcttccagctaac
ttcgtcggcgtcatcaatgacttgcggagcaaagacaagtcgattccaacgctaccgatc
tcccggactgccaggaagtacttgaaggaccccatcatttccttgaagtggatgtccacc
agctctgtgtgctgttttacccataaggaggttattatattgtactataaaaatcaaggc
catgaaagccttaagatcataggaaaggagccattgggctacgttccaaacagcttggac
ttcaaactcaacaaggaccatatcagccgaacttttaacagctccattaagcttgtaaaa
atgagagtacttcttttgaaccaaaagcatcaccattcgcaattggcaatcgggaaacct
atcagttggaatgataagttggccgagttgttggcaaagaaatactacgaggaagcattg
aatgcctgctatttcttctattcttccaagggtattggggaattggttctcttttcgctc
ccagaatccaaggccattaggaagaaattggtgcatccgtatttgatgaagatattatgg
cagtccattccacacttcagtaactgtgccgtatactttaggatcttggccactttgatt
ggggagtcaaaagaaatcgattcagaattgacggaaatgatcgagatgttgtacgagaca
gtgtcagataaagcagaattctttgacagtcttgaaaactatcttatttcggggacaatt
acaacattgtcacctttggtcttaaaggcgctcgtatcttattatggagaatgtggtaaa
ggtgaacctttgacagaaatattgtgcacaatcaacatcacgtttcttgacattgacttg
accatccaagtgtgtcaaaagaacaagcttgacgaatgcttgatattcgtttataatttc
ttgattcacgattacgacacacctttattgcatttcttgtcggagattcagaacaatcga
gttgatcctcgaaacgaatctaaggttttcaactacttgtcctacatcttgacaggcaga
cagtatccgattgacaaatttatagaatattcagaggagcaaagagccaagcttcggaca
atcaacattctattcaggcatgaaactgagtttcttgggattcaagtgaaggaaacatca
atatttcctatattaacgatgcttttgaagtacaattccttcgaaatgctttctacattg
aatgagtttttcgaagattcaattttaaacgaggaaattgagagttccatttcccgtcag
ttcattatagatgcgttattggatatttatgcttccaatgacttttcaaatacagataag
tgccatctatcgatatttgttggacgaaactactccaaatattcacagttcatcagatta
agtgactcaattcttaatcaaattcttgacaatcttttgaatttcaaccatccggagatc
aaggtcgattgtgaacttgcgatccaaagtttgttgactgcttttgagccatttgatgaa
aagaagctaattgaaaaactcagctacaaaaagttctacaatgttttgataagcatatac
aagggagaaggaaagtactacaaagttttacaaatatggcttaaccaacttgatgaaggt
catgcggacttgaccaatgtcaaagatgagctgttcaatgtactcactgagtgttttagt
aacaccaagctaggtatcgataaggtgaatctcaacactttaatcaaggataacttcgtc
aaattggctaccattaacacgaacaactttgtctacataattaacaactatgagccatct
ttgcacaaacagatcctaaaagtcaatgaaggttcagttgtgttcagctatttggatgaa
ttattcaaattgggatgcaacgattcggagttgattgtgaagtattctgagtgtttgagc
cagttcaactcgtcacacctttatggattcctaaaggcgaagtaccaatttgttgaagga
aatgacatccacaacttggaaactattttgtcagatgccaagcagatcaatgcgttgaca
atacctctaaccagcgagggtaaataccaagagagtttggactacttactcgagcaattg
gaaagtatcaaagagctcgaaaagtttgatgagtcgttcaaattgtatttgctgataatc
gaatctcctggtttctatagccaacagcaaatgtcaacagcctctcttgcattgaacttg
aatgagcaatattggttgaagttgatagactgcttgattggattgtccaaggagatgcct
accatcaacgagttcatctataagagtttcaggaagataagtgacatcaagcttaacccc
aatgacaaaaatgaaacgtcgtttttaaagatcttcgacacatttcttaacaataatgac
cagaccaccctcttgaacgtccggaacatcttgattgagatccttatcagctacagctat
gagagtgaaattctccgattgagttacaaaatcatcaaccaaaacatccacgataagttg
aatgtaattaagtatcacaacctcaagggatggctgataagctgcaagcactgcactaac
tgtggtaaacagctctacggctcccacatcgacttgagcaacttcatggtttgggaacaa
cgacaacaaaccgtattgaacatgatgtcagatgtgaaagatgctgaaagcacagaccag
ttgcggttggtgtttttcaagtgcaatcatggttaccactacaagtgtcttcggaacttg
agtagcgacacctgtgtggtatgcacccaataa
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integrated database retrieval system
