Yamadazyma tenuis: 18246024
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Entry
18246024 CDS
T03099
Symbol
NCR1, PSN45_000341
Name
(RefSeq) niemann-Pick type C-protein 1
Organism
cten
Yamadazyma tenuis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
Patched
NPC1_MLD
AMPK1_CBM
ACR_tran
CBM53
Motif
Other DBs
NCBI-GeneID:
18246024
NCBI-ProteinID:
XP_006687824
UniProt:
G3B7N2
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All DBs
Position
1:complement(join(670556..671810,672332..675900))
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AA seq
1607 aa
AA seq
DB search
MYGNCGKKSFFGAQLPCPSSTKAVEPDTDSKNLLRDICGADFPVDHVCCSPEQITALQAN
LKKVDPLISSCPACRKNFYDFFCEFTCSANQSMFVNISKTAVASDTKKEIVTELTQYVAP
GSAERFFDSCKNLKFSATNGYAMDLIGGGATNYTQFLKFLGDEKPLLGGSPFQINFAYGV
EKNSPMTLRAPSMRDCNDSTYKCACSDCEEACPVLEPFEGLDGHRSVAGLPYLTFASIMG
MVAFVVGMGIFHMRIARARRAREAAGFVELVEQTSVEAVLVSQKSGVVEYFKRLDSRFIE
SIETGFTNLGYFSAKFPGFTILCSLFLIALLSMGMIWLEFETDPVNLWVSPNEPQLKNYQ
YFEETFGEWYRIEQIIVSRKDDGPILDWKTVQWWFDNELALQEFEDGNETLSLEDFCFKP
LGDYCAIESFTQYFGGNILNLDEKNWQKSLQDCTNSPVNCLPTFQQPLKKNLLFNQDDVL
DSKAFTVTLLLNKNSKDLEYTQKVEKYENYLKDWLLKLSHENPHFNIAFSTEVSLTQELN
QSTNTDIKIVVISYLLMFLYASVSLGGQIPTKLKLKSLLYTRFELGLAGIIIILLSVTSS
LGFFSLIGLKSTLIIAEVIPFLVLAIGIDNIFLIVHELKAVNEDFETVDAELEVRVSKAL
GRIGPSCFISAILQVSMFLLATNVDMPAVKNFAFYSAGAIIVNVFLQMTCFVSLLTLDQK
RLEDGRLDCMPWIKVTIAIEEDEYSGNFEYNFSKVLRKYYAPKILSKTAKPKILTVFIFW
FGISLSLLPYIELGLDQKIALPSESYLVNYFDSVAKYLNVGPPIFMVMKNFDLSKRENQQ
KVCGKFSTCEEFSLSNVLEQEYQRGNLSTVVDPLSNWLDDFLTWLNPNLDQCCRLKKNTQ
EFCSPTAPERLCEVCYLNHDPPYNINMDGLPEGDEFMFFFNEWIQSPSDPCPLGGKAPYG
TAVSSNETSIVSSYFRTSHGPLRTQSDFITAYRNSLRIVDEVKSYQGEEAEMFAFSPFYI
FFVQYENIIKLTFSLLAVALLLIWVLGTVVLGSVRSASVLAATVVSVLVNIGGILAVWGV
SLNAVSLVNLVICVGLAVEFCIHIVRGFTKAEDTIDENDESLNDADGDFIGTESIFKDAR
TIKTYHTLVNIGGSVLGGITITKLIGICVLAFTRSKIFEVYYFRMWLSLVPKGPQEVILT
GTFDNWSKSLHLVKQSDGSFSLEVPFPADSEKVLFKYVVDGDWVVSSHDKSEKDASGNEN
NYLSGEDLVSVKSAGAAVPLAGGLTAAVVSKEAKATVMPKEEQKTSLGEPGIVIPQDAEQ
LKVFETVRDVDAKALNEPELSAEEKKKQKKKVKRTKQKAKKKKAAKVIGTAGAAGAGAAG
SEGVSGTTEESEESPEPEAKEVKVEEPAAEPVAAEEPAAEPVVEEPVAAEEVAEPVVAEP
VVAEPVVAEPVVEAPVVAAVEEKTVEPVAEAPVEEKATEAVEAPVEPVAATSSADPAYHS
LDPLADGKEIDAAPVKDEDEEIVIAQGKGKDIEAQILAQETGDVTIEEIQPTDSERAKLT
EEANISQKSDKSVVAKKEVKKEVKKEVKKEEPKKKRGFVSRLKKIFS
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcaactgtggtaaaaagtctttctttggtgctcagttaccatgtccgtctagc
accaaagcagtggagcccgacaccgattccaaaaatttactaagagatatttgtggagca
gactttcctgtggaccacgtatgctgctccccagaacaaattactgctttacaagccaat
ttgaagaaagttgatcctcttatcagttcttgtcccgcatgccgcaagaacttctacgac
ttcttctgtgaattcacttgttcggccaaccaatcgatgtttgtaaacatctccaagacg
gccgttgcctccgacactaagaaggagatagtcaccgaattgacccagtacgttgccccc
gggtctgctgaaaggttttttgactcgtgcaaaaacttgaagtttagtgccaccaacggg
tatgccatggacttaataggcggtggagctactaactacactcagttcttgaagttcttg
ggtgacgaaaagccattacttggaggcctgccgtttcaaatcaattttgcttatggtgtc
gagaagaattccccaatgaccttgagagcaccatcaatgagagactgcaacgactcgacg
tacaaatgcgcctgctcggactgtgaggaggcgtgtcccgtattggagccttttgaaggt
ttggacggccatcgctctgtggcaggattgccgtacttgacgtttgctctgattatggga
atggttgcgtttgtagtgggaatgggtatattccatatgcgtattgctcgtgctcggagg
gcccgcgaggctgctgggtttgtggaattggtggagcagacgtctgtggaggcagttttg
gtttcacagaagagtggagtggtggagtactttaagagactcgatagcaggttcattgag
agtatcgaaaccggattcacgaacttggggtactttctggcaaagttccctggtttcacg
atattatgctcacttttcctcattgccttattgctgatgggaatgatttggttggagttt
gagacggatcctgtgaatttgtgggtgagccccaacgagcctcagctcaaaaactaccaa
tattttgaagaaacgtttggagaatggtatagaatcgagcagattattgtgagtcgaaag
gatgatggtccgatattggactggaagacggtacagtggtggtttgacaatgagttggct
cttcaggaatttgaagatgggaacgagactttatcacttgaagacttctgtttcaaaccg
ttgggagactactgtgctatcgagtctttcacccagtattttggcggtaatatcctcaat
ttggatgagaaaaactggcagaaactgcttcaggattgtacaaattcccctgtaaactgc
ttacccacattccaacaaccgttaaaaaaaaacttgttgttcaaccaagatgatgtgttg
gactcaaaagcgttcacagtgacgttgttgctcaataagaacctgaaggaccttgagtat
actcaaaaagttgaaaagtacgagaactacttgaaggactggttattaaaattgagtcac
gagaatccccacttcaatattgcctttagcactgaggtatccttgacgcaggaattgaat
cagtctacaaacacagatatcaagattgtggtgatttcgtacttgttgatgtttctctat
gcgtctgtctccttgggaggccaaattcctacaaagttgaagttgaagagcttactttac
acgagatttgagttgggattagctggaataatcatcatcttactttcggtgacctcatca
ttgggatttttctcgttaattggcttgaagtctaccttgatcattgctgaagtcatcccg
ttcttggtgttggctattggaatcgacaacattttcttgatagtacatgaattgaaggct
gttaatgaagatttcgaaactgtcgatgcagagctagaagtcagagtatcaaaggcccta
ggaagaatagggccttcgtgcttcataagtgctattcttcaggtgtcaatgtttttgttg
gctaccaacgttgatatgcctgccgtgaagaattttgccttttactcggcgggagccatt
atagtgaatgtgtttttgcagatgacatgctttgtgtcgttgttgacattggaccagaaa
cggttggaagatggccgtttggactgcatgccttggatcaaagttacaatcgcaatcgaa
gaagacgaatacctgggaaactttgagtataacttcagcaaagtgttaagaaagtattac
gctcctaagatcctttccaaaaccgccaaacctaagattctcacggtttttattttctgg
tttggaatttctttgagtctcttgccatacattgagcttggattggatcagaagatagca
cttccaagtgaatcatatttggtgaattactttgactcggtggccaagtatctaaacgta
ggtcctccgattttcatggtgatgaagaactttgacctttctaagcgcgagaaccaacag
aaggtatgtgggaagttctctacctgtgaggaattctcgctttcaaacgtattggagcag
gagtatcagcgtggaaacctatcgacggtggtggatccattgtccaactggctagatgat
ttcttgacgtggttgaacccaaatcttgaccagtgctgtcgccttaaaaagaacacccaa
gagttttgcctgccaaccgcacctgaaagactctgtgaagtatgttatttgaaccatgat
cccccttataatattaatatggacgggttacctgaaggagatgagtttatgttcttcttc
aatgaatggattcaactgcccagtgatccttgtcccttaggcgggaaagctccctacggt
accgccgtctcatcgaacgaaaccctgatagtctcgtcgtactttagaaccagccacggg
ccgttgaggacgcagctggactttatcaccgcctaccgtaactcattgcggattgtcgac
gaggtcaagtcataccagggagaggaggctgagatgtttgcgttctctccgttctacatc
ttctttgttcagtacgagaacatcattaagttgaccttttccttgcttgctgtagcattg
ttgcttatatgggtgttgggtacggtagtacttggatcggtgcgcagtgcactggtgctt
gcggcgacggtggtgctggttctcgtgaatatcggtggtatccttgcggtgtggggtgtc
tcattgaatgcagtgagtttggtaaatctcgttatctgcgtagggcttgcggtcgagttc
tgtattcatattgtacggggattcaccaaagctgaagacacaatcgatgagaatgacgag
tcactcaatgacgctgatggtgatttcattggtacagaaagtatctttaaggatgccaga
accatcaaaacctaccacacgcttgtgaatattggagggtctgtgttaggcggaatcacc
ataacaaagctcattggaatttgtgtgcttgcattcacaaggtccaagattttcgaggtg
tactatttccggatgtggctttcactcgtgcctaaaggacctcaggaagtcattcttact
gggactttcgataactggtctaaatccttacatttagtcaagcaatccgacggctctttc
ctgttggaagtgcccttcccggcagacagcgagaaagtgttgtttaaatacgttgtggat
ggagattgggtggtatcatcccacgacaagtctgagaaggacgctagtggtaacgaaaac
aactacttgagcggtgaagacttggtttcggtcaagagtgccggagccgccgtgccattg
gccggtggtttgaccgctgccgtggtgtcgaaggaagctaaggctactgttatgcccaag
gaggaacaaaagacctctttgggagaaccaggtatagtgattcctcaagacgccgagcag
ttgaaggtgtttgagactgtgagagacgttgatgccaaggcgttgaacgagccggaattg
agtgctgaagaaaagaagaagcaaaagaagaaggtcaaaagaaccaagcaaaaggctaag
aagaagaaggctgcgaaagtcataggaactgctggtgctgctggtgctggtgctgctggt
tctgagggtgtcagtggtactactgaagagagtgaagagagtcctgagcccgaagccaag
gaggttaaagtcgaagaacctgctgctgagccagttgctgccgaagaacctgctgccgag
ccagttgtcgaagaaccggttgcggctgaggaagttgctgagccagtcgttgctgagcca
gtcgttgctgagccagtcgttgctgagccagtcgttgaagctccagttgtcgctgccgtc
gaggaaaagactgtcgaaccagttgctgaagctcctgttgaagaaaaggccaccgaggcc
gtcgaagctcctgttgagccagttgctgccacaagctccgccgatcccgcctaccactcc
ttagaccctcttgccgatggtaaggaaatcgatgccgcacccgtcaaagatgaagacgaa
gagatcgtcattgcccaaggtaagggcaaggatatcgaggcccaaatcttggcccaggaa
accggcgatgtaaccattgaagaaattcaacctactgacagcgaaagagccaagttgact
gaagaagccaacatctcccaaaagtctgacaaatccgtcgtggctaagaaagaagtcaag
aaggaagttaagaaggaagtcaagaaggaagagccaaagaagaagaggggatttgtgtcc
agattaaagaaaatcttctcctag
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