Yamadazyma tenuis: 18246030
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Entry
18246030 CDS
T03099
Symbol
TOP3, PSN45_000566
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03440
Homologous recombination
cten03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18246030 (TOP3)
03460 Fanconi anemia pathway
18246030 (TOP3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cten03032
]
18246030 (TOP3)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18246030 (TOP3)
Enzymes [BR:
cten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
18246030 (TOP3)
DNA replication proteins [BR:
cten03032
]
Eukaryotic type
DNA Topoisomerases
18246030 (TOP3)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
18246030 (TOP3)
FA (Fanconi anemia) pathway
18246030 (TOP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF6293_C
Motif
Other DBs
NCBI-GeneID:
18246030
NCBI-ProteinID:
XP_006688044
UniProt:
G3B9F7
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Position
1:complement(1141541..1143391)
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AA seq
616 aa
AA seq
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MKVLCVAEKPSIAKEVTSVLSGGRSTRRDSRSKYNANFDFKFTFPGHGLCDVTMTSVTGH
ITSMDFPAEYAWGRVPPGRLLDAPVKIQPDKSKLAIHQNIANEARSANYLMIWTDCDREG
EAIGYEILEAAKKGNTRLSLSSVWRPHFSHLEKNHILSAARNPQNLNMKTVEAVHCRQEV
DLRVGASFTRLLTDILRRSKLVDEIVSYGTCQFPTLGFVVDRYKRVKNFVPEKFWYISTS
VEKSNQTVSFSWAKTHFFDRLFVVMLYEECMKSTHGTIKGVTRKPTSNFKPFPLTTVSLQ
KDCATYFKMSAKEALDAAEKLYQSGWISYPRTETDMFPPEMDLRSIIQTHTQDSRWGHYA
TSLMTVDGKYGIPRKGRNNDKSHPPIHPVKYVNLETITNDKQRKVYEYVVRRFLACCSTD
AKGFQTVAELQWGNETFRASGLEVTEKNYLDVYTYRTWSSTEQLPPFVAGERVNLKSAEV
KEGKTSPPNHMTETELIALMDANGIGTDATIAEHIHKIEQRSYITKKKTGKSHIILPTEL
GMGLIEAFSSISFANNISLSKPFLRKRLESLLKEIEEGRATKEFSLRETISLYKNAFALT
AEEQSVLVNEFKKFQT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtactctgtgtggccgagaagccttcgatagccaaggaggtcaccagtgttctc
agcggagggcgcctgacgcgacgggactctcgttccaagtacaatgccaactttgacttc
aaattcaccttccccggccatggcttgtgcgatgtcaccatgacctcagtcaccggccat
atcacatccatggactttcccgccgagtacgcgtggggaagagtccctccagggcgtctc
ttggatgccccggtcaaaattcagcccgacaagtctaaactcgccatccaccagaacatt
gccaacgaggcccgatctgctaactacctaatgatatggaccgattgtgatcgtgaaggc
gaggccattgggtacgagatcttggaggctgccaagaagggtaacacccggttgtctctc
tcgtcggtgtggaggcctcacttctcccatttggagaagaatcatattctctctgctgct
cgaaatccccagaacttgaacatgaagacggtggaagcggtgcattgccgacaggaggtc
gacctacgggttggggccagtttcacacggctcttgaccgatattctcagaagaagcaag
cttgtggacgagattgtgtcgtatgggacgtgccagttccctacattagggtttgtggtt
gaccggtacaaacgggtgaagaactttgtgcccgaaaagttctggtacatttccactagt
gtcgagaaactgaaccaaacggtgctgtttctgtgggccaaaacccatttttttgatcgg
ttgtttgtggtgatgctctatgaggaatgcatgaaatcaacccatggaaccataaaaggt
gtcaccagaaaacccacctccaacttcaagccgttccctttgacaacagtgctgcttcaa
aaagactgtgccacctacttcaagatgagtgccaaagaagccttggatgcggctgaaaag
ctctatcaaagcggatggatctcgtatccaagaaccgaaaccgacatgttcccccccgag
atggacctccgaagtatcatacaaacacacacacaagactcacggtgggggcattatgcc
accagtttgatgactgtggatgggaaatatggtattccacggaaaggtagaaacaacgat
aaatcccatcctcccatccatcccgtgaagtacgtgaaccttgaaaccatcaccaacgac
aaacaacgcaaggtgtacgaatatgtggtgcgacggtttctagcgtgttgctctacagat
gccaaagggtttcaaacggtggccgagctccaatggggaaacgagacgtttagagcctcg
ggtcttgaagtcaccgaaaagaactatttggatgtttacacctaccggacctggctgtcg
accgaacaactcccgccttttgtagcaggagagcgggtcaatttgaagtccgctgaagtt
aaagaaggtaaaacctcacctcctaatcatatgaccgaaaccgaactaattgcattgatg
gatgccaatgggattggaaccgatgccaccatcgccgagcacatccacaaaatagaacaa
cgtctgtatatcaccaagaagaagaccggcaaaagccatatcatattacccaccgagttg
ggaatggggctcattgaagccttcagcagtatcagcttcgccaacaacatctcattgtcc
aagccgtttttacgaaaaagactcgagctgctcttgaaagaaatcgaagaaggtcgagcc
accaaggagttttcactaagggaaacgattctgctctataagaacgcatttgccttgacg
gcagaggagcagagcgtgttggtgaacgagttcaaaaagtttcaaacttga
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