Yamadazyma tenuis: 18246058
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Entry
18246058 CDS
T03099
Symbol
TFB2, PSN45_000445
Name
(RefSeq) RNA polymerase II transcription factor B 52 kDa subunit
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cten
Yamadazyma tenuis
Pathway
cten03022
Basal transcription factors
cten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18246058 (TFB2)
09124 Replication and repair
03420 Nucleotide excision repair
18246058 (TFB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
18246058 (TFB2)
03400 DNA repair and recombination proteins [BR:
cten03400
]
18246058 (TFB2)
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
18246058 (TFB2)
DNA repair and recombination proteins [BR:
cten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
18246058 (TFB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Planc_extracel
DUF432
Motif
Other DBs
NCBI-GeneID:
18246058
NCBI-ProteinID:
XP_006687928
UniProt:
G3B8K8
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All DBs
Position
1:887583..889079
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AA seq
498 aa
AA seq
DB search
MSTGDLFKVTVINHLESLDDNTQSRLYAAPATCLSIYRLLPPMAKFHIMSMLFYEKNVAI
KDLEKWSKPNTRHLQIESLERMRSLHLVQLSESGKYIRLHPIFKKNFADCLTGNQAPDAF
GNLDTTVEKHTVDLKFLDTFASTKWETILHYMVGTELSSTPSRSVLRLLKSGGLMEGNSD
YAQELKITNKGFQFLLQDINAQIWTLLLQYLDLTLELQMDAVDVLNFIFLLGSLELGKSY
SVSALSDTQIEMLSDLRDFGLVYQRSATSNKFYPTRLATTLTSDSNSLQTPSMAIDKANS
GIDSTDSKQRQESIIIETNFKVYSYTQSPLEIAILNLFVHLRTRFANMVTGQITRESIRN
ALYNGITAGQVIKFLETHAHPQMKMLAQEKLDKKIEFDASNNINTATGKSTDAPMQHKLE
ILPPNVVDQIKLWQLELDRIQTFDGYLFREFNNQIDYESLRNYASEIGVLVWSDDKKRTC
FVTKEGLKQVSNFSSRRR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaggggatttgtttaaagtcactgtcatcaaccacttggaaagtttggatgat
aacactcagtcccgattgtatgcggcacctgcgacgtgcttgtcgatatatcggttgcta
ccgccaatggccaagtttcacatcatgctgatgcttttctacgagaagaacgtagccatc
aaagatttggagaaatggagtaaaccaaataccagacacctccagatcgagtccttggag
agaatgagatccttacacttggtgcagttgtcggagtccggaaagtatattcgtttgcac
cctatcttcaaaaagaactttgctgattgtttgacaggtaatcaagctcctgatgcattt
gggaacttggacacaactgttgaaaaacatacagtggacttaaagttcttggacacattt
gcatcaacaaaatgggagaccattttgcactatatggtggggacggaattatctctgaca
cctagtaggtcagtattgagattgttaaaactgggtggattaatggaaggaaattctgac
tatgcccaagaattaaagatcacaaacaaagggtttcaattcttgttgcaggatattaat
gcacaaatatggacattattattgcagtatttggatttgactttggagttgcaaatggat
gcagtggatgttcttaatttcatatttttgcttggatctctagagctaggaaagagctac
agtgtttctgccttgagtgatactcagattgaaatgctctctgatctaagagattttgga
ttggtatatcagagatctgcgacctcaaacaagttttatccaactagattagccaccact
ttgacttctgattctaattctttacaaactccttccatggccatagacaaagccaactcg
ggtattgattcaaccgactccaagcagagacaagaatccatcatcatcgaaaccaacttt
aaagtgtattcgtatacccaaagtcctttggaaattgccatattaaatttatttgttcac
ctaagaacaagatttgctaacatggtgaccggccaaatcacaagagagtcgataaggaac
gcattatataatggtataactgccggacaggtcattaagttcttggaaactcatgcccat
cctcagatgaaaatgctagcgcaagaaaagcttgataagaagatagagtttgatgccagc
aacaacatcaacactgctactggcaaatctacagacgctccgatgcaacacaaacttgaa
atattacctcccaacgttgttgatcaaattaagttgtggcagttggagttggacagaatt
caaactttcgatgggtatttgttcagagaattcaacaaccaaatagactatgagtccttg
aggaactatgccagcgaaatcggtgtgcttgtttggtctgacgataagaaaagaacatgt
tttgtgacaaaggaaggattaaaacaagtttctaatttctctagtagaagaagataa
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