Yamadazyma tenuis: 18246217
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Entry
18246217 CDS
T03099
Symbol
MSD1, PSN45_002259
Name
(RefSeq) aspartate--tRNA ligase msd1
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
cten
Yamadazyma tenuis
Pathway
cten00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18246217 (MSD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cten01007
]
18246217 (MSD1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cten03016
]
18246217 (MSD1)
03029 Mitochondrial biogenesis [BR:
cten03029
]
18246217 (MSD1)
Enzymes [BR:
cten01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
18246217 (MSD1)
Amino acid related enzymes [BR:
cten01007
]
Aminoacyl-tRNA synthetase
Class II (A)
18246217 (MSD1)
Transfer RNA biogenesis [BR:
cten03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18246217 (MSD1)
Prokaryotic type
Other AARSs
18246217 (MSD1)
Mitochondrial biogenesis [BR:
cten03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
18246217 (MSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
18246217
NCBI-ProteinID:
XP_006689222
UniProt:
G3BFA3
LinkDB
All DBs
Position
2:complement(1938849..1940909)
Genome browser
AA seq
686 aa
AA seq
DB search
MRNWATAKRFPRTIRYPSPNPVSLQWTRSYSTEFPPKEVTVQKFTFPLASHSVKHISNNL
DKFLQGNPVTLNGHLNRRPRLMAKHAFAELRDSNGDTIQMMLAHGVTPEKYFGVVEKSIP
EESISVSGKVQLKQSRSGEREWELLVENYQVLNQSNLDAARLDKLKHSSPKDLPPQFRYL
QLRTPHYQNNIRTRSKIANLIRNTFIQNHDFVEVETPLLFKSTPEGAREFLVPTRKPNAF
YALPQSPQQYKQLLMSSGITKYFQIAKCFRDEDLRADRQPEFTQVDLEMSFVSHSDQVGV
VVEDVVHRVWKDIAKFPVYTINKNGNLEEISEFSTHKINFTKVPYIEALTKYGIDKPDLR
SSLSLIDLSGFFTPLKNTNFPVLEACVLRDAFDPSKKFKVPKALSDSNSYSRRKPIVIPI
KTQPDASEWYKNFVEKHLITPTSSFNESQLESTLNLHPGDILAFADRAELPYENPTPLGK
FRQLAINEFPNKWKRMIELSNGDLTDNYCTKDMVVASWVVDFPLFAPTESGGSPSDEYPT
YELSQLESNHHPFTMVKLEDYDLLETDPLKVRGEHYDLVINGVEVGGGSRRIHDADLQKY
VFKHVLGIHHYNDLFGHLLHALSMGCPPHAGLALGFDRLCAMVVGSPNIRDVIAFPKNQS
GVDPIVESPSSVPEKTLSEYFITTKN
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattgggctaccgccaaaagattccctcgtacgatacgatatccactgccaaat
ccagtgtcactacaatggacccgtctgtactcaaccgaattccctccaaaggaagtcact
gtacagaagttcaccttcccactcgcatcacactcagtcaagcacatttccaacaacctc
gataagttcttacaaggcaacccggtaactctcaatgggcatttgaataggcggccacgt
ctcatggccaagcatgcatttgccgagctcagagactctaatggagatactatacaaatg
atgttagctcatggagttacacccgaaaagtactttggggtggtggaaaagtccatccct
gaagaaagtatcagcgtcagcggtaaagtacagttgaagcagagtagaagtggcgaacgg
gaatgggagcttctcgtagaaaattaccaagttttaaaccaatctaatttagatgccgct
agattggacaagttgaaacactcatcacccaaagacttgcctcctcagttccgttacttg
caactcagaacaccccactaccaaaacaacatacgaacccgaagcaaaattgctaatttg
atcagaaacacttttattcagaaccatgactttgtggaggttgagactccattactcttc
aaatcgacaccagaaggtgctcgggagttcttggtgcccacgaggaaacctaatgctttc
tatgctttacctcagtcgcctcagcagtataagcagttgttgatgagctcaggtatcacc
aaatactttcagatcgcaaagtgtttccgagacgaagacttgagagccgatagacagcca
gagttcacccaggtggacttggaaatgagctttgtcagtcacagcgaccaagttggtgtg
gtagtcgaagatgttgttcaccgtgtgtggaaggatattgctaagtttccggtttacacc
atcaataaaaatggtaatctcgaagaaatcagtgagttctccacacacaagataaacttc
acaaaggttccatacattgaagccttgacaaagtatggaattgacaaacccgatttaagg
tcttccctctccttgatagacttgagtggtttcttcaccccactcaaaaatacaaacttc
ccagtcctcgaagcgtgtgtgttaagagatgcttttgacccttcaaaaaaattcaaagtt
ccaaaagccttgagtgacagcaatagctattctcggagaaagcctattgtcatccccatc
aagacccaacctgatgctctggaatggtacaaaaactttgttgaaaagcaccttatcaca
cctacctcctcgttcaacgagtcccaattggaatccactttaaatttacatcctggtgac
attttggcatttgctgacagggctgagttgccgtatgaaaatcctactcctttaggaaag
ttcagacaacttgccataaacgagttcccaaataagtggaagagaatgatcgagttgagc
aatggagacttaactgacaattactgcacaaaagatatggtagtggcttcctgggttgtt
gacttcccattatttgcaccaactgaatccggagggtcacctagtgacgaatatccaaca
tacgaattgagtcaacttgaatcgaatcatcatcctttcaccatggtcaaacttgaagat
tatgacttattggagacagaccctttaaaagtcagaggggagcactacgacttagtaatc
aatggagtcgaagtaggaggtgggtccagaagaatccacgatgctgacctccaaaaatac
gttttcaagcatgtcttaggaatccaccactacaatgatttgtttggccatctcctacat
gctttgagtatgggatgtcctccacatgcaggtttggctctaggttttgatcgattgtgt
gcaatggttgttggaagcccaaacataagagatgttattgcgttccccaaaaatcaatca
ggtgtggatcctatcgtcgaaagtccttcctcagttccagaaaagactcttagcgagtac
ttcatcaccaccaaaaattaa
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