Yamadazyma tenuis: 18246410
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Entry
18246410 CDS
T03099
Symbol
SPT4, PSN45_002899
Name
(RefSeq) transcription elongation factor spt4
KO
K15171
transcription elongation factor SPT4
Organism
cten
Yamadazyma tenuis
Pathway
cten03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
18246410 (SPT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
18246410 (SPT4)
03019 Messenger RNA biogenesis [BR:
cten03019
]
18246410 (SPT4)
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18246410 (SPT4)
RNA polymerase I system
18246410 (SPT4)
Messenger RNA biogenesis [BR:
cten03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
18246410 (SPT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
RNHCP
DUF7117
Motif
Other DBs
NCBI-GeneID:
18246410
NCBI-ProteinID:
XP_006683764
UniProt:
G3AWB9
LinkDB
All DBs
Position
3:1068828..1069166
Genome browser
AA seq
112 aa
AA seq
DB search
MSSRSDRACMLCGIIQTYRKFVDEGCPNCESVLHYQDNDDNQIQDCTSPSFEGLVALGDD
NKQSWVARWLRIDSFVPALYAVKINGKLPPHIVSDLLEQNVNYRPRDGSAED
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctagatctgacagagcgtgcatgttgtgtggaatcatccagacatacagaaag
ttcgtcgatgaagggtgccccaactgtgagagtgtgttgcactatcaagacaatgacgac
aaccagatccaggattgcacatcgccatcgtttgaaggtttggtggctttgggagacgac
aacaaacagtcatgggtcgccagatggttgagaatagactcgttcgtgccggccctctac
gccgtcaagatcaacgggaagcttccgcctcatatagttagtgacttgttggagcagaat
gtcaactatagacccagagacggcagtgctgaagattag
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integrated database retrieval system
