Yamadazyma tenuis: 18247218
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Entry
18247218 CDS
T03099
Symbol
SQT1, PSN45_003935
Name
(RefSeq) 60S ribosomal subunit assembly or modification protein
KO
K14818
ribosome assembly protein SQT1
Organism
cten
Yamadazyma tenuis
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cten03009
]
18247218 (SQT1)
Ribosome biogenesis [BR:
cten03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
18247218 (SQT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
PQQ_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Beta-prop_DCAF4
CFAP43_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
18247218
NCBI-ProteinID:
XP_006686296
UniProt:
G3B4M6
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Position
5:553317..554552
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AA seq
411 aa
AA seq
DB search
MSAPQEYINEEEPEEEFLRAEEVGEEVPDDTNLPPPDDEDDEDIDMEQDITIDLSNNSWT
YFDQHKDSIFTIFRHPTLPMVVTGGGDNTAYLWTTHTQPPRFVGELSGHKESVVAGGFTS
DGKYVVTADMNGFIQVHKSSKGGQRWIKFGELQEVEEVLWVRVHPRLPYFAFGATDGSVW
VYQIDGGLVQVMSGFSHTLECNAGDFIDKGTEELFLVTVSEDGSVISWNCFTAQVVYKLS
PHDEFKGVESPWVSLSVFENKMAVGARDGNLAIINYDTGRLVHSVKTLENIDDVAELSVE
ALSWCQTPSINLLAVGLVSGDLLLFDTLQWRVRNSVKLEDTITKLKFLANTPVLIGSCMN
GRIYKWDARTMKELFVGYGHNMGVLDFAVLDDGKVATAGDEGVSLVFATEQ
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaccacaggaatacataaacgaagaagagcctgaagaagagtttcttcgtgcc
gaagaagtgggcgaagaggtgcctgatgacaccaaccttccaccaccagatgatgaagat
gacgaagatatcgatatggagcaggacattacgatagacttatccaacaactcctggacg
tatttcgaccagcacaaagactcgattttcacaatattccgtcacccaacgttacccatg
gtggtgaccggtgggggtgacaacacagcatatttgtggacgacccatacacaacctccc
agatttgtaggagaattgagtggtcataaagagtctgtggttgcaggaggtttcaccagc
gacgggaagtacgtggtgacggctgacatgaatgggttcatccaggtgcacaagagcagt
aaagggggccaaagatggatcaaatttggtgagttacaagaagtcgaagaagtattatgg
gtcagggttcaccctagattaccatattttgcattcggtgccactgacgggtccgtatgg
gtgtaccagattgatggagggttagtccaagtaatgtctggatttctgcatacgttggag
tgtaatgctggagactttatcgataaggggacagaagaactttttcttgtaacggtgtca
gaggacggttcagtcatcagttggaactgttttaccgcccaagtggtgtacaagttgctg
cctcatgatgaattcaagggagttgaaagtccttgggtttctctcagtgtgtttgagaac
aagatggccgtgggagctagagacggtaatttagccatcatcaactatgatacgggtcga
cttgtgcacagtgtaaagactttggagaacattgacgatgtggccgaactttctgttgag
gcgctaagctggtgccagactccttctatcaacttgttggcagtagggttggtttccgga
gacttgttactattcgatactttgcagtggcgtgtacggaattcagtcaagttggaggac
actatcaccaagttgaaattcctcgccaacacaccggtgttgattggctcgtgtatgaat
ggccgtatatacaaatgggatgctcgtaccatgaaagagctttttgtgggatatggccat
aacatgggagtgttagactttgcggtgttggatgatggtaaggttgccaccgctggtgat
gagggggtgtcattggtgtttgctaccgagcagtag
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